KEGG   Rattus norvegicus (rat): 84490
Entry
84490             CDS       T01003                                 
Symbol
Fen1
Name
(RefSeq) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03030  DNA replication
rno03410  Base excision repair
rno03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    84490 (Fen1)
   03410 Base excision repair
    84490 (Fen1)
   03450 Non-homologous end-joining
    84490 (Fen1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rno03032]
    84490 (Fen1)
   03400 DNA repair and recombination proteins [BR:rno03400]
    84490 (Fen1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    84490 (Fen1)
DNA replication proteins [BR:rno03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    84490 (Fen1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     84490 (Fen1)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     84490 (Fen1)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   84490 (Fen1)
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc XPG_I_2 DUF3560 HHH_5
Other DBs
NCBI-GeneID: 84490
NCBI-ProteinID: NP_445882
RGD: 621821
Ensembl: ENSRNOG00000020531
UniProt: Q5XIP6
Position
1:complement(216270016..216274873)
AA seq 380 aa
MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET
TSHLMGMFYRTIRMMENGIKPVYIFDGKPPQLKSGELAKRSERRAEAEKQLQQAQEAGAE
EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAATEDM
DCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYCESVRG
IGPKRAVDLIQKHKSIEEIVRRLDPSKYPVPENWLHKEARQLFLEPEVLDPESVELKWSE
PNEEELVKFMCGEKQFSEERIRSGVKRLNKSRQGSTQGRLDDFFKVTGSLSSAKRKEPEP
KGPAKKKAKTGGAGKFRRGK
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgggaattcaaggccttgccaaactaattgctgatgtggcccccagtgccatccgtgag
aatgacatcaagagctactttggtcgcaaagtggccattgatgcctccatgagcatttac
cagttcctgattgctgttcgtcagggtggggacgtactgcagaacgaggagggggagacc
accagccacctgatgggcatgttctaccgtaccatccgcatgatggagaatggcatcaag
ccggtgtatatctttgatggcaaaccaccacagctgaagtcgggggagctggccaaacgc
agtgagcggcgtgcagaggccgagaagcagctgcagcaggctcaggaggcgggggcagag
gaggaggtggaaaagttcaccaagcggcttgtgaaggtcaccaagcaacacaacgatgag
tgcaaacacctgctgagcctcatgggcatcccataccttgatgcgcccagcgaggcagag
gccagctgtgctgccctggcaaaggctggcaaagtctatgccgcagccacggaggacatg
gactgcctcacttttggcagccccgtgctaatgcgacacttaactgccagtgaggccaag
aagctgcccatccaagagttccacctgagccgcgtcctgcaagagctgggtctgaaccag
gagcagtttgtggatctgtgcatcctgctgggtagcgactactgtgagagtgtccgtggc
attggacccaagcgggctgtggacctcatccagaagcacaagagcatcgaggagatcgtg
aggcggctggatcccagcaagtaccctgttccggaaaactggctccacaaggaagcccgg
cagctcttcctggagccggaagtactggacccagagtctgtggagctgaagtggagtgag
ccaaacgaagaagagttggtcaaatttatgtgcggtgaaaagcagttttctgaggagcgg
attcgtagtggggtcaaacggctgaataagagccgccaaggcagcacccagggacgccta
gatgatttcttcaaggtgacaggctcactctcctcagccaagcgcaaggagccagagccc
aaggggcctgccaagaagaaagcaaagactgggggagcaggaaagttcagaaggggaaaa
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (38)   

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