KEGG   Rattus norvegicus (rat): 84495
Entry
84495             CDS       T01003                                 
Symbol
Xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    84495 (Xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    84495 (Xrcc1)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     84495 (Xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT Abhydrolase_6
Other DBs
NCBI-GeneID: 84495
NCBI-ProteinID: NP_445887
RGD: 619823
Ensembl: ENSRNOG00000019915
UniProt: Q9ESZ0
Position
1:89268721..89296619
AA seq 631 aa
MPEISLRHVVSCSSQDSTHRAENLLKADTYRKWRSAKAGEKTISVVLQLEKEEQIHSVDI
GNDGSAFVEVLVGSSAGGATAGEQDYEVLLVTSSFMSPSESRSGSNPNRVRIFGPDKLVR
AAAEKRWDRVKIVCSQPYSKDSPYGLSFVKFHSPPDKDEAEAPSQKVTVTKLGQFRVKEE
DDSANSLRPGALFFNRINKAASASASDPAGPSYAAATLQASSAASSASPVPKVGGSSSKL
QEPPKGKRKLDLGLEDKKPPSKPSAGPPAPKRPKLPVPSRTPAATPASTPAQKAVPGKPR
GEGTEPRGARAGPQELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHL
ICAFANTPKYSQVLGLGGRIVRKEWVLDCYRMRRRLPSRRYLMAGLGSSSEDEGDSHSES
GEDEAPKLPRKRPQPKAKTQAAGPSSPPRPPTPEETKAPSPGPQDNSDTDGEQSEGRDNG
AEDSGDTEDELRRVAKQREQRQPPAPEENGEDPYAGSTDENTDSEAPSEADLPIPELPDF
FQGKHFFLYGEFPGDERRKLIRYVTAFNGELEDYMSDRVQFVITAQEWDPNFEEALMENP
SLAFVRPRWIYSCNEKQKLLPHQLYGVVPQA
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgccggagatcagcctccgccacgtcgtgtcctgcagcagccaggactcgacccatcgt
gccgaaaatcttctcaaggctgacacttaccggaagtggcggtcagccaaggcaggagag
aagaccatctctgtggtcctacagttggagaaggaggaacagatacacagtgtggacatt
ggaaacgatggctcggccttcgtggaggtgctagtgggcagctcggctggaggggccaca
gctggtgaacaggactatgaggtccttctggtcacctcctctttcatgtccccatctgag
agccgaagtggctcgaatcccaaccgtgttcgcatttttggacctgacaagttagtccgg
gcagcagcagagaagcgctgggaccgagttaaaatcgtgtgcagccagccatacagcaag
gactcaccctacggcctgagttttgtgaagtttcacagccctccagacaaagacgaggcg
gaggctccatctcagaaggtgacagtgaccaagctcggccagttccgtgtgaaagaggag
gatgacagtgccaactccctgaggccaggggcgctcttcttcaatcggatcaacaaggcg
gcttcagcctctgcaagtgacccggcaggacccagctatgcagcggctacactgcaggcc
tctagtgcggcctcctcagcctcgccagtccccaaggttgggggcagctcttccaagctt
caggagcctcccaaagggaagaggaaactggacttgggtctagaagacaagaagcctccg
agcaaaccctcagcagggccgcctgcccccaagagacccaagttgcctgttcctagccgt
accccagctgcaacgccagcctctaccccagcacagaaagccgtcccagggaagccccgg
ggagaaggcacagagcctaggggagctcgcgctggaccccaggagcttggcaagatcctg
cagggggtggtggtggtgctcagtggcttccagaaccccttccgttcagagctccgggac
aaggccctggagctgggggccaagtatcggccagactggaccccggacagcacacacctc
atctgtgcctttgctaacactcccaagtacagccaggtcctgggcctcggaggccgtatt
gttcgtaaagagtgggtgctggactgttaccgcatgcggcgccggctgccctcccggagg
tacctcatggcaggccttggatccagcagtgaggacgagggggactctcacagtgagagc
ggtgaagatgaagctcccaagcttccccggaagaggccccagcccaaagccaagacccag
gcagcaggacccagctcacccccgaggccaccaaccccagaagagaccaaagcaccatca
ccaggaccccaggacaatagtgacactgatggggaacagtcagaaggacgggacaatggg
gcggaagattctggggacaccgaagatgaactgaggagggtggccaagcagagggagcaa
aggcagcccccagccccagaggagaatggcgaggacccgtatgcaggctccacagatgag
aacacagacagcgaggctccctcagaggctgacctgccaattccagagctcccagacttc
ttccagggcaagcacttcttcctgtacggcgagttccctggggatgagaggaggaagctc
atccgatatgtgacagctttcaatggtgagctcgaggactacatgagcgaccgggtccag
tttgtcatcacggcccaggagtgggatcccaactttgaggaggccctgatggaaaatcct
tccctggccttcgtccggccccgctggatctacagttgtaatgagaagcagaagttactc
ccccaccagctctatggggtggtgccccaggcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (30)   

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