KEGG   Rattus norvegicus (rat): 84496
Entry
84496             CDS       T01003                                 
Symbol
Stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform 2
  KO
K17597  double-stranded RNA-binding protein Staufen
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rno01009]
    84496 (Stau1)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    84496 (Stau1)
Protein phosphatases and associated proteins [BR:rno01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     84496 (Stau1)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     84496 (Stau1)
   mRNA cycle factors
    Stress granule specific factors
     84496 (Stau1)
SSDB
Motif
Pfam: Staufen_C dsrm Dicer_dsRBD DND1_DSRM
Other DBs
NCBI-GeneID: 84496
NCBI-ProteinID: NP_001103377
RGD: 621778
Ensembl: ENSRNOG00000007781
UniProt: Q3T1L2 Q9ESY8 Q66HP4
Position
3:complement(176099053..176144947)
AA seq 489 aa
MYKPVDPHSRMQSTYSYGMRGGAYPPRYFYPFPVPPLLYQVELSVGGQQFNGKGKMRPPV
KHDATARALRTLQSEPLPERLEVNGRESEEENLNKSEISQVFEIALKRNLPVNFEVARES
GPPHMKNFVTRVSVGEFVGEGEGKSKKISKKNAARAVLEQLRRLPPLPAVERVKPRIKKK
SQPTCKLQTAPDYGQGMNPISRLAQIQQAKKEKEPEYMLLTERGLPRRREFVMQVKVGHH
TAEGAGTNKKVAKRNAAENMLEILGFKVPQAQPAKPALKSEEKTPVKKPGDGRKVTFFEP
SPGDENGTSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGVSQGHHTKDFARAAPNPAK
ATVTAMIARELLYGGTSPTAETILKSNISSGHVPHGPRTRPSEQLYYLSRAQGFQVEYKD
FPKNNKNECVSLINCSSQPPLVSHGIGKDVESCHDMAALNILKLLSELDQQSTEMPRTGN
GPVSACGRC
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgtataagcccgtggacccccactctcggatgcagtccacctacagctatggcatgcgt
ggaggtgcctatccccccagatacttttacccatttccagttccaccgttactctaccaa
gttgagctctccgtgggaggacagcagtttaatgggaagggaaagatgagaccacctgtg
aaacatgatgccactgcccgagccctgaggactctgcagagtgagcccctaccagagagg
ctagaggtaaatggaagagaatcagaagaagaaaaccttaataaatcagaaataagccaa
gtgtttgagattgcgctgaagcggaatttgcctgtgaattttgaggtggcccgggagagt
ggcccgccacacatgaagaactttgtgaccagggtttcagttggggagtttgtaggggaa
ggagaagggaaaagcaagaagatctccaagaagaatgcggcaagggccgtgctggagcag
ctaaggaggctgccacctctacctgctgtggagcgagtgaagcccagaatcaagaagaaa
agtcagcccacctgcaagctacagactgcccccgactatggccaagggatgaatcctatt
agcagactggcacagatccagcaggcaaaaaaggagaaggagccggagtacatgctcctt
acagaacgaggtcttccacgtcgcagggagtttgtgatgcaggtgaaggttgggcatcac
accgcagaaggagcaggtaccaataagaaggtggccaagcgcaatgctgctgagaacatg
ctggagatcctggggttcaaagtcccccaggcgcagcctgccaagccagcactcaaatca
gaagagaagactccagtaaagaaaccaggagatggaaggaaagtaacattttttgaacct
agccctggggatgaaaatggaaccagtaataaagaggatgagttcaggatgccctatctt
agccatcagcagctgccagccgggatcctccccatggtgccagaggttgcccaggctgtc
ggggttagtcaaggacaccataccaaagatttcgccagggcagctccaaatcctgccaag
gccacggtaactgccatgatagcccgagaattgttgtacgggggcacctcgcccacagcc
gagaccattttaaagagtaacatctcttcaggacatgtaccccatggacctcgcacaaga
ccctctgagcaactgtactacctttccagagcccagggattccaggttgaatacaaagac
ttccccaagaacaacaagaacgagtgtgtatctctcatcaactgctcttcacagccacct
ctcgtcagccatggcatcggcaaggatgtggagtcctgtcatgatatggctgcactgaac
atcttaaagctgctgtctgagttggaccaacagagcacagagatgccaaggacaggaaac
ggaccagtttcagcgtgcgggaggtgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (3)   
   RefSeq(pep) (2)   
DNA sequence (14)   
   RefSeq(nuc) (2)   
   GenBank (6)   
   EMBL (6)   
Protein domain (4)   
   Pfam (4)   
All databases (33)   

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