KEGG   Rattus norvegicus (rat): 84509
Entry
84509             CDS       T01003                                 
Symbol
Ran
Name
(RefSeq) GTP-binding nuclear protein Ran
  KO
K07936  GTP-binding nuclear protein Ran
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03008  Ribosome biogenesis in eukaryotes
rno03013  Nucleocytoplasmic transport
rno03250  Viral life cycle - HIV-1
rno05166  Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    84509 (Ran)
   03008 Ribosome biogenesis in eukaryotes
    84509 (Ran)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    84509 (Ran)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    84509 (Ran)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    84509 (Ran)
   03009 Ribosome biogenesis [BR:rno03009]
    84509 (Ran)
   03016 Transfer RNA biogenesis [BR:rno03016]
    84509 (Ran)
   03036 Chromosome and associated proteins [BR:rno03036]
    84509 (Ran)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    84509 (Ran)
   04031 GTP-binding proteins [BR:rno04031]
    84509 (Ran)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     84509 (Ran)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    84509 (Ran)
  Pre-60S particles
    84509 (Ran)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    84509 (Ran)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     84509 (Ran)
   Spindle formation proteins
    84509 (Ran)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   84509 (Ran)
GTP-binding proteins [BR:rno04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    84509 (Ran)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RNA_helicase G-alpha Pox_A32 ArgoMid AAA_24 Septin AAA_7 AAA_16 SRPRB TsaE DUF5906 AAA_22 AAA_33
Other DBs
NCBI-GeneID: 84509
NCBI-ProteinID: NP_445891
RGD: 620367
Ensembl: ENSRNOG00000000938
UniProt: P62828 A6J0S3
Position
12:complement(33311155..33314339)
AA seq 216 aa
MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK
FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLC
GNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMP
ALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL
NT seq 651 nt   +upstreamnt  +downstreamnt
atggccgcccagggagagccgcaggtccagttcaagctcgtcctggtgggcgacggcggc
accgggaagacgacgttcgtgaagcgccacttgacgggcgagtttgagaagaagtatgta
gccaccctgggcgtggaggtgcacccgctcgtcttccataccaacagaggacccatcaag
ttcaacgtgtgggacacagccggccaggagaagttcgggggcctgcgcgatggctactac
atccaagcccagtgtgccattataatgtttgacgtaacatcaagagttacttacaagaac
gtacctaactggcatagagatctggtacgcgtgtgtgaaaacatccccattgtattgtgt
ggcaacaaagtggatattaaagacaggaaagtgaaggcaaaatctattgtcttccaccga
aagaagaatcttcagtactatgacatttctgccaaaagtaactacaactttgaaaagcct
ttcctctggcttgccagaaagctcattggagatcctaacttggagttcgttgccatgcct
gctcttgccccacctgaggtggtcatggacccagctttggcagcacagtacgagcatgat
ttagaggttgctcagacgactgcgctcccggatgaggatgacgacctgtga

  All links  
Ontology (7)   
   KEGG BRITE (7)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (28)   
   RefSeq(nuc) (2)   
   GenBank (13)   
   EMBL (13)   
Protein domain (19)   
   Pfam (19)   
All databases (70)   

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