KEGG   Rattus norvegicus (rat): 84573
Entry
84573             CDS       T01003                                 
Symbol
Otof
Name
(RefSeq) otoferlin
  KO
K19949  otoferlin
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    84573 (Otof)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    84573 (Otof)
SSDB
Motif
Pfam: C2 Ferlin_C FerB FerI
Other DBs
NCBI-GeneID: 84573
NCBI-ProteinID: NP_001263649
RGD: 620646
Ensembl: ENSRNOG00000009967
UniProt: A0A0G2K867
Position
6:31647869..31744476
AA seq 1998 aa
MALIVHLKTVSELRGRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNE
VLEIQIFNYSKVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQA
ADGTVGPWDDGDFLGDESLQEEEKDSQETDGLLPGSRPSTRTPGEKSFRRAGRSVFSAMK
LGKTRSHKEEPQRQDEPAVLEMEDLDHLAIRLGDGLDPDSVSLASVTALTSNVSNKRSKP
DIKMEPSAGRPMDYQVSITVIEARQLVGLNMDPVVCVEVGDDKKYTSMKESTNCPYYNEY
FVFDFHVSPDVMFDKIIKISVIHSKNLLRSGTLVGSFKMDVGTVYSQPEHQFHHKWAILS
DPDDISAGLKGYVKCDVAVVGKGDNIKTPHKANETDEDDIEGNLLLPEGVPPERQWARFY
VKIYRAEGLPRMNTSLMANVKKAFIGENKDLVDPYVQVFFAGQKGKTSVQKSSYEPLWNE
QVVFTDLFPPLCKRMKVQIRDSDKVNDVAIGTHFIDLRKISNDGDKGFLPTLGPAWVNMY
GSTRNYTLLDEHQDLNEGLGEGVSFRARLMLGLAVEILDTSNPELTSSTEVQVEQATPVS
ESCTGRMEEFFLFGAFLEASMIDRKNGDKPVTFEVTIGNYGNEVDGTSRPQRPRPRKEPG
DEEEVDLIQNSSDDEGDEAGDLASVSSTPPMRPQITDRNYFHLPYLERKPCIYIKSWWPD
QRRRLYNANIMDHIADKLEEGLNDVQEMIKTEKSYPERRLRGVLEELSCGCHRFLSLSDK
DQGHSSRTRLDRERLKSCMRELESMGQQAKSLRAQVKRHTVRDKLRLCQNFLQKLRFLAD
EPQHSIPDVFIWMMSNNKRIAYARVPSKDLLFSIVEEELGKDCAKVKTLFLKLPGKRGFG
SAGWTVQAKLELYLWLGLSKQRKDFLCGLPCGFEEVKAAQGLGLHSFPPISLVYTKKQTF
QLRAHMYQARSLFAADSTGLSDPFARVFFINQSQCTEVLNETLCPTWDQMLVFDNLELYG
EAHELRDDPPIIVIEIYDQDSMGKADFMGRTFAKPLVKMADEAYCPPRFPPQLEYYQIYR
GNATAGDLLAAFELLQIGPSGKADLPPINGPVDMDRGPIMPVPVGIRPVLSKYRVEVLFW
GLRDLKRVNLAQVDRPRVDIECAGKGVQSSLIHNYKKNPNFNTLVKWFEVDLPENELLHP
PLNIRVVDCRAFGRYTLVGSHAVSSLRRFIYRPPDRSAANWNTTVRLLRGYHMLCNGGPS
SCPTGEVVVSMEPEVPVKKLETLVKLDATSDAVVKVDVAEDEKERKKKKKKGPSEEAEEE
EPDESMLDWWSKYFASIDTMKEQLRQHETSGIDLEEKEEMDSTEGLKGPVKNKEKSRAAK
EEKKKKNQNPGPGQGSEAPEKKKAKIDELKVYPKELESEFDNFEDWLHTFNLLRGKTGDD
EDGSTEEERIVGRFKGSLCVYKVPLPEDVSREAGYDPTYGMFQGIPSNDPINVLVRIYVV
RATDLHPADINGKADPYIAIKLGKTDIRDKENYISKQLNPVFGKSFDIEASFPMESMLTV
AVYDWDLVGTDDLIGETKIDLENRFYSKHRATCGIAQTYSIHGYNIWRDPMKPSQILTRL
CKEGKVDGPHFGPHGRVKVANRVFTGPSEIEDENGQRKPTDEHVALSALRHWEDIPRVGC
RLVPEHVETRPLLNPDKPGIEQGRLELWVDMFPMDMPAPGTPLDISPRKPKKYELRVIVW
NTDEVVLEDDDFFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYLFPFDY
LAAEEKIVMSKKESMFSWDETEYKIPARLTLQIWDADHFSADDFLGAIELDLNRFPRGAK
TAKQCTMEMATGEVDVPLVSIFKQKRVKGWWPLLARNENDEFELTGKVEAELHLLTAEEA
EKNPVGLARNEPDPLEKPNRPDTSFIWFLNPLKSARYFLWHTYRWLLLKLLLLLLLLLLL
ALFLYSLPGYLAKKILGA
NT seq 5997 nt   +upstreamnt  +downstreamnt
atggccctgatcgtccacctcaagactgtttctgagcttcgaggcagagctgatcggatc
gccaaagtcactttccgaggacagtccttctattcccgggtcctggagaactgcgaggat
gtggctgacttcgatgagacattccggtggccagtggctagcagcatcgacaggaatgaa
gtgttggagattcagattttcaactacagcaaagtcttcagcaacaaactaatcgggacc
ttccgcatggtgctgcagaaggtggtggaggagaatcgggtagaggtgtctgacacgctg
atcgatgacaacaatgctatcatcaagaccagcctaagcatggaggtccggtatcaagcc
gcagatggcacagtaggcccttgggatgatggagactttctgggagatgaatcccttcag
gaggaagagaaagacagccaggagacagatggtctgctacctggctcccgacccagcacc
cggacacccggcgagaagagctttcgaagagcgggaaggagtgtattctcggccatgaaa
ctcggcaagactcggtcccacaaagaggagccccaaagacaagatgagccagcggtgctg
gagatggaggacctggaccacctagccatccggctgggggatgggctggatcctgactca
gtgtctctagcctcggtcactgctctcaccagcaatgtctccaacaaacggtctaagcca
gatattaaaatggaaccgagtgctgggagacccatggattaccaggtcagcatcacagtg
attgaggctcggcagctggtgggtttgaacatggaccccgtggtgtgcgtggaggtgggc
gatgacaaaaaatacacatccatgaaggagtccacaaactgcccttactacaacgagtac
ttcgtctttgacttccacgtctctcctgatgtcatgtttgacaagatcatcaagatctcg
gttatccattctaagaacctgcttcgaagcggcactctggtgggctccttcaaaatggat
gtggggaccgtgtactcccagcctgaacaccagttccatcacaaatgggctatcctgtca
gaccccgatgacatctctgccgggctgaagggctatgtaaagtgtgatgtcgccgtggtg
ggcaagggagacaacatcaagacaccccacaaggccaacgagacagatgaggatgacatt
gaagggaacttgctgctccccgagggcgtgcccccagaacggcagtgggcccggttctac
gtgaaaatttaccgagcagagggactgccccggatgaacacaagcctcatggccaacgta
aagaaggcgttcatcggtgagaacaaggacctcgtcgacccctacgttcaagtcttcttt
gctggacagaagggcaaaacatcagtgcagaagagcagctatgagccgctgtggaatgag
caggtcgtctttacagatctgttccccccactctgcaagcgcatgaaggtgcagatccga
gactccgacaaggtcaacgacgtggccatcggcacccacttcatcgacctgcgcaagatt
tccaacgatggagacaaaggcttcctgcctacgctcggcccagcctgggtgaacatgtac
ggctccacacgcaactacacgctgctggacgagcaccaggacctgaatgagggcctgggt
gagggggtgtccttccgtgcccgcctcatgttgggactggctgtggagatcctagacacc
tccaacccagagctcaccagctccaccgaggtgcaggtggagcaggccacacctgtctca
gagagctgcacagggagaatggaagaatttttcctatttggagccttcctggaagcctca
atgatcgaccggaaaaatggggacaagccagtgacctttgaggtgaccataggaaactat
ggcaatgaagtcgatggtacatcccggccccagaggcctcggccccggaaggaacctggg
gatgaagaagaggtagacctgattcagaactccagtgacgacgagggtgatgaagccggg
gacctggcctcagtgtcctccaccccacctatgaggccccagatcacagacaggaactat
ttccacctgccctacctagagcgcaagccctgcatctacatcaagagctggtggcctgac
cagcggcgccgtctctacaacgcaaacatcatggaccacattgctgacaagctggaagaa
ggtctgaatgatgtccaggagatgatcaaaacggagaagtcctacccggagcgacgcctg
cggggtgtgctagaggaactcagctgtggctgccaccgcttcctctccctctcggacaag
gaccagggtcactcgtcccgcaccaggctggatcgggagcgcctcaaatcctgtatgagg
gagctggagagcatgggacaacaagccaagagcctgagggctcaggtgaagcgacacact
gtacgggacaagctgaggttatgccagaacttcctgcagaagctacgcttcctagctgat
gagccccagcacagcatccccgatgtgttcatttggatgatgagtaataacaaacgtatc
gcctacgcccgcgtgccttccaaagaccttttgttctccattgtggaggaggaattgggc
aaggactgcgccaaggtcaagaccctcttcctgaagctgccaggaaagaggggcttcggc
tcggcaggctggacagtacaggccaagctggaactctacctgtggctgggcctcagcaag
cagagaaaggacttcctgtgtggcctgccttgtggcttcgaggaggtcaaggcagcccaa
ggcctgggtctgcattcctttccgcccatcagccttgtctacaccaagaagcaaaccttc
cagctccgagcccacatgtatcaggcccgaagcctcttcgccgctgacagcactgggctc
tctgatccttttgcccgagtcttcttcatcaaccagagccagtgcacggaggtcctaaac
gagacactgtgtcctacttgggaccaaatgctggtatttgacaacctggagctgtacggt
gaagctcatgagttacgagatgatccccccatcattgtcattgaaatctacgaccaggac
agcatgggcaaagctgacttcatgggccggacctttgccaagcccctggtgaagatggca
gacgaggcatattgcccgcctcgcttcccgccccagcttgagtactaccagatctaccga
ggcaacgccacggccggagacctactggctgcctttgagctgctgcagattggaccatcg
gggaaggctgacctgccacccatcaatggcccagtggacatggacagagggcccatcatg
cctgtgcctgtgggaatccggcccgtgctcagcaagtacagagtggaggtgctgttctgg
ggcctgagggacttaaagagggtgaacctggcccaggtggaccggccacgggtggacatc
gagtgtgcgggaaaaggggtacaatcgtccctgatccacaattataagaagaaccccaac
ttcaacaccctggtcaagtggtttgaagtggacctcccagagaatgagctcctgcaccca
cccttgaacatccgggtggtggactgccgggcctttggacgatacaccctggtgggctcc
catgcagtcagctcactacgacgcttcatctaccgacccccggaccgctcggccgccaac
tggaacaccacagtcaggcttctccggggctaccacatgctgtgcaatgggggcccctct
tcttgccccacaggggaggttgtagtgagcatggaacctgaagtgccagttaagaagctg
gagaccctggtgaagctggatgcgacttctgatgctgtggtcaaggtggatgtggctgaa
gatgagaaggaaaggaagaagaagaaaaagaaaggcccatcagaggaggcagaggaggag
gaacccgatgagagcatgctggattggtggtccaagtactttgcctccattgacacaatg
aaggagcaacttcgacaacatgagacctctgggattgatttggaagagaaggaagaaatg
gatagcactgagggcctgaaggggccagtgaagaacaaggagaagtccagagctgcaaag
gaggaaaaaaagaagaaaaatcagaaccctggccctggccagggatcggaggctcctgag
aagaagaaagccaagatcgacgagcttaaggtgtatcccaaggagctagagtcggagttt
gacaactttgaggactggctgcacacgttcaacctgttacggggcaagactggggatgat
gaggatggctccacagaggaagaacgcatagtaggccgattcaagggttccctctgtgtg
tacaaagtgccactcccggaggatgtgtctcgtgaagctggctacgatcccacctacgga
atgttccagggcatcccaagcaatgaccccattaatgtgctggtccgaatctatgtggtc
cgggccacagacctgcacccggctgacatcaatggcaaagccgacccctatatcgccatc
aagttaggcaagactgacatccgagacaaggagaactacatctccaagcagctcaaccct
gtctttggaaagtcctttgacattgaggcctccttccccatggagtccatgctgacagtg
gctgtgtacgactgggatctggtgggcactgatgacctcatcggagaaaccaagatcgac
ctggaaaaccgcttctacagcaagcaccgtgctacctgcggcatcgcgcagacctattcc
atacatggctataatatctggagagaccccatgaagcccagccagatcctgacccgcctc
tgcaaagagggcaaagtggacggcccccactttggtccccatgggagagtgaaggtcgcc
aaccgtgtcttcacagggccttcagagatagaggatgagaatggtcagaggaagcccaca
gatgagcacgtggcactgtctgctctgagacactgggaggacatcccccgggtgggctgc
cgccttgtaccggagcacgtggagaccaggccgttgctcaaccctgacaagccaggcatt
gagcagggccgcctggagctgtgggtggatatgttccccatggatatgccggcccctgga
acacctctggatatctcccccaggaaacccaagaagtatgagctgcgcgtcatcgtgtgg
aacacagatgaggtggtcctggaagacgacgatttcttcacgggagagaagtccagtgat
atttttgtgagggggtggctgaagggccagcaggaggacaaacaggacacagacgtacat
tatcactccctcacgggtgagggcaacttcaactggcgatacctgttccccttcgactac
ctggcggccgaagagaagatcgttatgtccaagaaggagtccatgttctcctgggatgag
acggagtacaagatacctgcgcggctcaccctgcagatctgggacgctgaccacttctca
gccgatgacttcctgggggccatcgagctggacctgaaccggttcccgaggggcgccaag
acagccaagcagtgcaccatggagatggccaccggggaggtggatgtgcccctggtttcc
atctttaaacagaaacgtgtcaaaggctggtggcccctcctggcccgcaatgagaatgat
gaatttgaactcacgggcaaagtagaggcagagttacacctcctcacggcagaggaggcg
gagaagaacccggtgggcctggctcgcaatgaacctgaccctctagaaaaacccaatcgg
cccgacacaagcttcatctggttcttgaaccctctcaagtctgcccgctacttcctgtgg
catacctaccgctggctgctcctcaaactcctgctgctcctcctcctgctgctgctgctc
gccctgtttctctactctctgcctggctacctggccaagaagatccttggggcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (13)   
   UniProt (1)   
   RefSeq(pep) (12)   
DNA sequence (14)   
   RefSeq(nuc) (12)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (40)   

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