KEGG   Rattus norvegicus (rat): 84593
Entry
84593             CDS       T01003                                 
Symbol
Cetn2
Name
(RefSeq) centrin-2 isoform 1
  KO
K10840  centrin-2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    84593 (Cetn2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    84593 (Cetn2)
   03036 Chromosome and associated proteins [BR:rno03036]
    84593 (Cetn2)
   03400 DNA repair and recombination proteins [BR:rno03400]
    84593 (Cetn2)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     84593 (Cetn2)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    84593 (Cetn2)
   Centrosome duplication proteins
    Centriole replication proteins
     84593 (Cetn2)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      84593 (Cetn2)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 AIF-1 EF-hand_5 EF-hand_4 EF-hand_14 Dockerin_1 SurA_N_3 SurA_N_2 RTP SUB1_ProdP9 HerA_C TerB Maestro_HEAT DUF5580_M DUF4601 LETM1_RBD MJ1010-like_2nd DUF6694
Other DBs
NCBI-GeneID: 84593
NCBI-ProteinID: NP_001387862
RGD: 620247
Ensembl: ENSRNOG00000059593
Position
X:complement(155812212..155817186)
AA seq 178 aa
MELCSGRASNFKKTNMASSAQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDMKELK
VAMRALGFEPKKEEIKKMISEIDKEGTGKMNFSDFLTVMTQKMSEKDTKEEILKAFKLFD
DDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEQEFLRIMKKTSLY
NT seq 537 nt   +upstreamnt  +downstreamnt
atggagctgtgttccggaagggcctctaattttaagaagacaaacatggcatccagtgcc
cagagaaaaaggatgagccctaagcctgaacttactgaagaacagaaacaggaaatccgg
gaagcttttgatctctttgatgctgatggaactggaactatagacatgaaggaactaaag
gtggcaatgagggccctgggctttgaacccaagaaagaagaaatcaagaaaatgataagt
gaaatcgataaagaaggaacaggaaaaatgaacttcagtgactttttgacagtgatgact
cagaaaatgtctgagaaagacaccaaagaagaaatcctgaaagctttcaagctgtttgat
gatgatgagactggaaaaatatcgttcaagaatcttaagcgtgtggccaaggagctgggc
gagaacctgacagatgaggagctccaggaaatgattgatgaagctgatcgagatggagat
ggtgaggtcaatgagcaagagttcctgcgcatcatgaagaagaccagcctctattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (22)   
   Pfam (22)   
All databases (46)   

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