KEGG   Rattus norvegicus (rat): 84600
Entry
84600             CDS       T01003                                 
Symbol
Rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
  KO
K10628  V(D)J recombination-activating protein 1 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04068  FoxO signaling pathway
rno05340  Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    84600 (Rag1)
 09160 Human Diseases
  09163 Immune disease
   05340 Primary immunodeficiency
    84600 (Rag1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    84600 (Rag1)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     84600 (Rag1)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    84600 (Rag1)
SSDB
Motif
Pfam: RAG1 RAG1_imp_bd zf-RAG1 zf-C3HC4 zf-C3HC4_2 zf-RING_6 zf-RING_2 zf-RING_10
Other DBs
NCBI-GeneID: 84600
NCBI-ProteinID: NP_445920
RGD: 619790
Ensembl: ENSRNOG00000004630
UniProt: A6HNM3 G3V6K9
Position
3:complement(108372087..108383184)
AA seq 1040 aa
MAVPLPSTLRLSSAPDEIQHPHIKFSEWKFKLFRVRSFEKAPEEAQKEKDSSEGKPCLEQ
SPVVLDKPGGQNSVLTQRALKLHPKFSKKFHVDGKSSDKAIHQARLRHFCRICGNHFKSD
GHNRRYPVHGPVDAKTQSLFRKKEKRVTSWPDLIARVFRIDVKSDVDSIHPTEFCHNCWS
IMHRKFGSAHSQVYCPRNVTVEWHPHTPSCDICFTAHRGLKRKRHQPNVQLSKKLKTVLN
HARRDRRKRTQARVSSKEVMKKISNCSKIHLSTKLLAVDFPAHFVKSISCQICEHILADP
VETTCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLQSPVKSFLSILNSLMVKCPAQEC
NEEVSLEKYNHHVSSHKESKETLVHINKGGRPRQHLLSLTRRAQKHRLRELKIQVKEFAD
KEEGGDVKSVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLSCSQ
YHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHPFEWQPPLKNVSSRTDVGIIDGLSG
LASSVDEYPVDTIAKRFRYDSALVSALMDMEEDILDGMRSQDLDDYVSGPFTVVVKESCD
GMGDVSEKHGSGPAVPEKAVRFSFTVMRVTVEHGSQNVKIFEEPKPNSELCCKPLCLMLA
DESDHETLTAILSPLIAEREAMKSSELLLEMGGIPRTFKFIFRGTGYDEKLVREVEGLEA
SGSVYICTLCDATRLEASQNLVFHSITRSHAENLQRYEVWRSNPYHESVEELRDRVKGVS
AKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKNPNASKEERKRWQATLDKHLRKR
MNLKPIMRMNGNFARKLMTQETVDAVCELIPSEERHEALRELMDLYLKMKPVWRSSCPAK
ECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEG
NESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNALKNSGFTMNSKE
TLGDSLDIEDSLESQDSMEF
NT seq 3123 nt   +upstreamnt  +downstreamnt
atggctgtccccttgccatctaccctgagactcagttctgcacctgatgaaattcagcac
ccgcacatcaaattttccgagtggaaatttaagctgtttagggtgagatcctttgaaaag
gcacccgaagaagcacaaaaagagaaggattcctcagaagggaaaccttgtctcgagcag
tctccagtagttctagataagcctgggggtcagaattcagttctgactcaacgagcattg
aaactccatcctaaattttcaaagaaattccatgttgatgggaagtcaagcgacaaagca
attcaccaagccaggcttagacacttctgccgcatctgtggcaatcacttcaagagtgac
gggcacaaccggagatacccagtccacgggcccgtggacgctaaaactcaaagccttttc
cgaaagaaggaaaaaagagtcacgtcctggccagatctcattgccagagttttccggatt
gatgtgaagtcagatgttgactccatccaccccactgaattctgccataactgttggagc
attatgcacaggaagttcggcagtgctcacagtcaggtctactgcccaaggaatgtgacc
gtggagtggcacccccacacaccgtcctgtgacatctgctttactgcccatcggggactg
aagaggaagagacatcagcccaacgtgcagctcagcaagaaactaaaaactgtgctcaac
catgctagacgggaccgtcgcaagagaactcaggctagggtcagcagcaaggaggtcatg
aagaagatctccaactgcagtaagattcatctcagtaccaagcttcttgcagtagacttc
ccagcacactttgtgaaatccatctcctgccagatatgtgaacacattctggccgatccg
gtggagaccacctgtaagcacctgttctgtagaatatgcattctccggtgcctcaaggtc
atgggcagctattgtccctcgtgccgatatccatgcttccctactgacctgcagagtccg
gtcaagtcctttctgagcatcttgaattctctgatggtgaagtgtcctgcccaagagtgc
aatgaggaagtaagtctggaaaaatataaccaccatgtctcaagccacaaagaatctaaa
gagactttggtgcatattaataaagggggccggcctcgccagcatctcctgtcactgacg
cgaagggctcagaaacatcggctgagggagctcaagattcaagtcaaagaatttgcagac
aaagaagaaggtggagatgtgaagtctgtgtgcttgacgttgttcctgctggcactgagg
gcaaggaatgagcacagacaagctgatgagctcgaggccatcatgcaaggccggggctcc
ggtcttcaaccagctgtttgcttggccatccgtgtcaataccttcctcagctgtagccaa
taccataagatgtacaggacggtgaaagctatcactgggaggcagatttttcaacctttg
cacgctcttcgcaatgctgagaaggtcctcctaccaggctaccacccctttgagtggcag
ccccctctgaagaacgtgtcctccagaactgacgttggaattattgatgggctctctgga
cttgcctcctccgtagatgaatacccagtggacacaattgcaaagaggttccgctatgac
tctgctttggtgtctgctttgatggacatggaggaagacatcttggacggcatgagatcc
caagatcttgatgactacgtgagtggtcccttcaccgtggtggtaaaggaatcgtgtgat
ggaatgggggatgtgagtgagaagcacgggagtgggcccgcagttccagaaaaggcagtt
cggttctctttcaccgtcatgagagttacagtagagcatggctctcagaacgtgaagata
tttgaggaacccaagcccaattctgaactgtgttgcaagccactgtgccttatgctggca
gatgagtctgaccacgagacacttactgctattctcagccccctcatcgctgagagggag
gccatgaagagcagtgaattgctgctggagatgggaggcatccccaggacttttaaattt
atcttcaggggcactggatatgacgagaaacttgtcagggaagtagaaggcttggaagct
tctggctcagtctacatttgtacactttgtgatgccacccgtctggaagcctcccaaaat
cttgtcttccactccataaccagaagccacgccgagaatctgcagcgctatgaggtctgg
cggtccaatccctatcacgagtcagtggaagaactccgggaccgggtgaaaggagtctct
gccaaacctttcatcgagacagtcccttccatagatgcgcttcactgtgacattggaaat
gcagctgaattctataagattttccagctggagataggggaagtgtataaaaatcccaat
gcctctaaagaggaaaggaagagatggcaggccaccttggacaaacatctgcggaaaagg
atgaacttaaaaccaatcatgaggatgaatggcaactttgcccggaagcttatgacccaa
gagactgtggacgcagtttgtgagttaattccttctgaggagaggcacgaagctctcagg
gagctgatggacctttacctgaagatgaaaccggtgtggcgctcatcgtgtcctgctaaa
gagtgcccggagtccctttgtcagtacagtttcaactcacagcgtttcgctgagctcctc
tccaccaagttcaaatacagatacgagggcaaaatcaccaattactttcacaaaaccttg
gcacacgtccctgaaattattgaaagggatggctctattggggcatgggcaagtgagggc
aatgagtctggtaacaaactgtttaggcgcttccggaaaatgaatgccaggcagtccaag
tgctatgagatggaagatgtcctgaaacaccactggctgtatacttcaaaatacctccag
aagtttatgaatgcccataatgcattaaaaaactctgggtttaccatgaactcaaaggag
actttaggggactctttggacattgaggactctctggaaagccaagattcaatggagttt
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system