KEGG   Rattus norvegicus (rat): 85238
Entry
85238             CDS       T01003                                 
Symbol
Synj1
Name
(RefSeq) synaptojanin-1 isoform 1
  KO
K20279  synaptojanin [EC:3.1.3.36]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00562  Inositol phosphate metabolism
rno01100  Metabolic pathways
rno04070  Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00562 Inositol phosphate metabolism
    85238 (Synj1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04070 Phosphatidylinositol signaling system
    85238 (Synj1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    85238 (Synj1)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.36  phosphoinositide 5-phosphatase
     85238 (Synj1)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Inositol 5-phosphatases
    85238 (Synj1)
SSDB
Motif
Pfam: Syja_N DUF1866 Exo_endo_phos
Other DBs
NCBI-GeneID: 85238
NCBI-ProteinID: NP_445928
RGD: 69434
Ensembl: ENSRNOG00000002051
UniProt: Q62910 A6JLD7
Position
11:complement(43678709..43755526)
AA seq 1332 aa
MRKSWTCWSGSDASGGCSGGGCGRRRRRSRRKRAASEERRMAFSKGFRIYHKLDPPPFSL
IVETRHKEECLMFESGAVAVLSSAEKEAIKGTYAKVLDAYGLLGVLRLNLGDTMLHYLVL
VTGCMSVGKIQESEVFRVTSTEFISLRVDASDEDRISEVRKVLNSGNFYFAWSASGVSLD
LSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLLRLMCGGVEIRTIYAAHKQAK
ACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIYLDDCVSSFIQIRGSVPLFWEQP
GLQVGSHRVRMSRGFEANAPAFDRHFRTLKDLYGKQIVVNLLGSKEGEHMLSKAFQSHLK
ASEHASDIHMVSFDYHQMVKGGKAEKLHSVLKPQVQKFLDYGFFYFDGSAVQRCQSGTVR
TNCLDCLDRTNSVQAFLGLEMLAKQLEALGLAEKPQLVTRFQEVFRSMWSVNGDSISKIY
AGTGALEGKAKLKDGARSVTRTIQNNFFDSSKQEAIDVLLLGNTLNSDLADKARALLTTG
SLRVSEQTLQSASSKVLKNMCENFYKYSKPKKIRVCVGTWNVNGGKQFRSIAFKNQTLTD
WLLDAPKLAGIQEFQDKRSKPTDIFAIGFEEMVELNAGNIVNASTTNQKLWAVELQKTIS
RDNKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHT
TSLCFVCSHFAAGQSQVKERNEDFVEIARKLSFPMGRMLFSHDYVFWCGDFNYRIDLPNE
EVKELIRQQNWDSLIAGDQLINQKNAGQIFRGFLEGKVTFAPTYKYDLFSEDYDTSEKCR
TPAWTDRVLWRRRKWPFDRSAEDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHR
PVVALIDIDIFEVEAEERQKIYKEVIAVQGPPDGTVLVSIKSSAQENTFFDDALIDELLQ
QFAHFGEVILIRFVEDKMWVTFLEGSSALNVLSLNGKELLNRTITITLKSPDWIKTLEEE
MSLEKISVTLPSSTSSTLLGEDAEVSADFDMEGDVDDYSAEVEELLPQHLQPSSSSGLGT
SPSSSPRTSPCQSPTAPEYSAPSLPIRPSRAPSRTPGPLSSQGAPVDTQPAAQKESSQTI
EPKRPPPPRPVAPPARPAPPQRPPPPSGARSPAPARKEFGAPKSPGTARKDNIGRNQPSP
QAGLAGPGPSGYGAARPTIPARAGVISAPQSQARVSAGRLTPESQSKPLETSKGPAVLPE
PLKPQAAFPPQPSLPTPAQKLQDPLVPIAAPMPPSIPQSNLETPPLPPPRSRSSQSLPSD
SSPQLQQEQPTG
NT seq 3999 nt   +upstreamnt  +downstreamnt
atgcggaagagctggacctgctggagcggaagtgacgcttcgggcggctgtagcggcggc
ggctgcgggagaaggagaaggaggagccggaggaagagggctgcctctgaagaaaggaga
atggcgttcagcaaaggatttcgaatctaccacaaattggatcccccaccgttcagcctc
atagtggaaactaggcataaggaagaatgtctcatgttcgagtctggggccgtggcagtg
ctctcatctgcagaaaaggaggccattaaaggcacatatgccaaagtgctggatgcatat
ggacttttgggagttttacgattaaatcttggtgataccatgttgcattatctggtccta
gtcactggatgcatgtctgttgggaaaattcaagaatctgaagtcttccgagttacttcc
actgagtttatatcacttcgagttgatgcttcagatgaggaccgcatttcagaagtacga
aaggttttgaactcaggaaacttttattttgcatggtctgcatctggagtcagcttagat
ctgagtctgaacgcacatcgaagcatgcaggagcacacaactgacaataggtttttctgg
aatcagtctttgcatctgcatctcaagcactatggtgtgaattgtgatgactggttgtta
cggctcatgtgtggaggagtagagattagaacaatttatgctgcccataaacaggcaaaa
gcttgcctcatttcaagactaagctgtgagcgagctgggacaaggttcaacgtccgggga
acaaatgatgacggtcatgttgccaactttgtagagacagagcaggttatatacttagat
gactgtgtctcctccttcatacaaatccgaggatctgttccgttgttctgggagcaacca
gggttgcaagtgggatctcatcgtgttcgaatgtcaaggggatttgaagccaatgcgcct
gcctttgacaggcatttccgaacccttaaggacttatatggtaaacaaatagtagtaaat
ctgcttggatctaaggagggtgagcatatgctgagcaaggccttccagagtcacttgaaa
gcctctgaacacgcttctgatatccacatggtgtcctttgattatcatcaaatggttaaa
ggaggaaaggcagaaaaattgcacagtgttctcaaaccacaagtccagaagtttctagat
tatggatttttttatttcgatggcagtgcagttcaaaggtgccagagtggtacagttcgg
acaaactgcctggactgtctggatagaacaaacagtgtgcaggcgttccttggcttagag
atgctagctaaacagctggaagctctgggcttggctgaaaagcctcagttggtgactcgc
tttcaagaagttttccggtccatgtggtctgtgaatggcgattcaatcagtaaaatatat
gcaggcaccggagccctggaagggaaggccaagttaaaagatggtgcgcgatctgtcacc
agaaccattcagaataacttcttcgacagctccaagcaagaagccattgatgttctgctt
ctgggaaacactctgaacagcgacttagccgacaaagcccgggcacttctaactactggg
agtttgcgtgtgtctgaacagacattacagtcagcatcttccaaagtcttaaagaacatg
tgtgagaacttctacaagtactcaaagcccaagaagatccgagtgtgtgttggaacctgg
aatgtgaacggcgggaaacagttccgcagcatagcattcaagaaccagaccctcaccgac
tggcttcttgatgcacccaagttagctggcatccaggagtttcaagataagagaagtaag
ccaactgatatatttgcaattggctttgaagaaatggtggagctgaatgctgggaacatt
gtgaatgcaagcacaacaaaccagaagctgtgggcagtggaactgcagaagaccatctcc
agagacaacaagtatgttctcctggcctcggagcagttggtgggtgtctgcctgtttgtc
tttatcagaccgcagcatgctccctttatcagggatgttgcagtcgatactgtgaaaact
gggatgggaggcgcgactggaaataagggcgctgttgcaatccggatgctcttccacacc
accagcctttgctttgtctgcagtcactttgctgcaggccagtcccaagtcaaagagaga
aatgaagatttcgtagaaatagcacgaaaattgagtttccccatgggaagaatgctcttc
tcccatgattacgtattctggtgtggtgatttcaactatcgaatcgatcttcctaatgaa
gaagttaaagagctcataagacagcaaaattgggattctcttatagctggagatcaactc
atcaatcagaaaaatgcaggacagatctttagaggatttttagagggaaaagtaacgttt
gctccaacctataaatatgacttgttttccgaagactatgacaccagtgaaaagtgccgc
acccctgcttggacagaccgagtcctctggagaaggaggaagtggccttttgacagatca
gctgaagacttagatcttctgaatgctagtttccaagatgaaagtaaaatcctgtataca
tggactcctggcaccttgctgcactatggaagagccgagctgaagacttctgaccacagg
cccgttgtcgccctgatcgatatagatatatttgaagttgaagctgaagagagacaaaaa
atttataaagaagttattgcagtccagggcccaccggacggcacagtactggtctcaatc
aaaagttctgcacaagagaatactttctttgacgatgctttgatcgatgagcttctgcag
cagtttgcacacttcggcgaagttatacttataagattcgtagaagataaaatgtgggtt
acatttttggaggggagctctgccttgaatgttctgagcctaaatggtaaagagttatta
aatcggactataacaattactttaaaaagtccagactggatcaaaactttggaagaagag
atgagtttagagaaaatcagtgtcacattgccctcatcaaccagttccaccctgctcggt
gaagatgcagaggtctcagcggactttgacatggaaggtgatgtcgacgactacagtgct
gaggtggaggagcttcttcctcagcacctccagccatcctccagctctggcctcggcacc
tctccaagctcttcgccccggaccagtccctgccagtcacccacagcaccagagtactcc
gcaccttctcttcccatcagacctagtcgagcaccatcaagaactccaggacctctaagt
tcacagggtgctccagttgacacccagccagcagcccagaaggagtcttcccagaccata
gagcccaagaggccaccccctccccgcccagttgctcctccagcacgtcctgccccacca
cagaggccacctccaccttcaggggctaggagtccggcacctgctagaaaagaatttgga
gcacccaaaagcccgggaacagcacggaaagataatatagggcgtaatcagccttcccct
caagccggacttgcaggcccaggaccttctggatatggtgcagctagaccgacaattcca
gctcgtgctggagtgatcagtgcccctcagagccaggctcgggtgtctgctggaaggctg
actcctgaaagccaaagcaaacccttggagacatcgaaaggtcctgctgtccttccagaa
ccactgaagcctcaggctgcatttcctccgcagccttctctgcccacacctgctcaaaag
ttacaggacccacttgtccccatagcagcacctatgcctccctccattccccaatcgaat
ttggaaactccacccctgcccccacctcggagcaggtcatctcaaagcttgccttcagac
tcctcaccacagctacaacaggagcaaccaacagggtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (40)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (37)   
DNA sequence (49)   
   RefSeq(nuc) (37)   
   GenBank (6)   
   EMBL (6)   
Protein domain (3)   
   Pfam (3)   
All databases (114)   

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