KEGG   Rattus norvegicus (rat): 85241
Entry
85241             CDS       T01003                                 
Symbol
Pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
  KO
K02320  DNA polymerase alpha subunit A [EC:2.7.7.7]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03030  DNA replication
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    85241 (Pola1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rno03032]
    85241 (Pola1)
Enzymes [BR:rno01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     85241 (Pola1)
DNA replication proteins [BR:rno03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase alpha / primase complex
    85241 (Pola1)
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 zf-DNA_Pol DNA_pol_alpha_N DUF1744 DNA_pol_B_2 MTR4_beta-barrel
Other DBs
NCBI-GeneID: 85241
NCBI-ProteinID: NP_445931
RGD: 621816
Ensembl: ENSRNOG00000013322
UniProt: O89042
Position
X:complement(62028475..62342455)
AA seq 1468 aa
MAPVHGDDCKLETSAVSDSGSFVASRARREKKSKKGRQEALERLKKAKAGEKYKYEVEDL
TSVYEEVDEEQYSKLVQARQDDDWIVDDDGIGYVEDGREIFDDDLEDDALDTCGEGSDGK
AHRKDRKDVKKPSVTKPNNIKAMFIASAGKKTTDKTVDLSKDDLLGDILQDLNTETPQIA
PPPVLIPKKKRSTGASPNPFSVHTATAVPSGKIASPVSRKEPPLTPVPLKRAEFAGDLAQ
PECPEDEQESGVIEFEDGDFDEPMDTEEVDEEEPVTAKIWDQESEPVEGVKHEADPETGT
TSFLDSFLPDVSCWDIDQKDENSFLLQEVQVDSNHLPLVKGADDEQVFQFYWLDAYEDPY
NQPGVVFLFGKVWVESAKTHVSCCVMVKNIERTLYFLPREMKIDLNTGKETATPITMKDV
YEEFDSKISAKYKIMKFKSKIVEKNYAFEIPDVPEKSEYLEVRYSAEVPQLPQNLKGETF
SHVFGTNTSSLELFLMNRKIKGPCWLEVKNPQLLNQPISWCKFEAMALKPDLVNVIKDVS
PPPLVVMSFSMKTMQNVQNHQHEIIAMAALVHHNFPLDKAPPKPPFQTHFCVVSKPKDCI
FPCAFKEVIKKKNMEVEVAATERTLLGFFLAKVHKLDPDILVGHNICGFELEVLLQRINE
CKVPFWSKIGRLRRSNMPKLGSRSGFGERNATCGRMICDVEISVKELIHCKSYHLSELVQ
QILKTERIVIPTENIRNMYSEPSHLLYLLEHIWKDARFILQIMCELNVLPLALQITNIAG
NIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKPGDEDEEIDGDTNKYKKG
RKKAAYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEFNICFTTVQRVASETLKATEDE
EQEQIPELPDPNLDMGILPREIRKLVERRKQVKQLMKQQDLNPDLVLQYDIRQKALKLTA
NSMYGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDSIMINTNST
NLEEVFKLGNKVKNEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTSDGNYITKQE
LKGLDIVRRDWCDLAKDTGNFVIGQILSDQSRDTIVENIQKRLIEIGENVLNGSVPVSQF
EINKALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVICQDGSNLPATQRAY
APEQLQKQDNLAIDTQYYLAQQIHPVVARICEPIDGIDAVLIALWLGLDSTQFRVHQYHK
DEENDALLGGPAQLTDEEKYKDCEKFKCLCPSCGTENIYDNVFEGSGMDMEPSLNRCSNI
DCKASPATFMVQLSNKLIMDIRRCIKKYYDGWLICEEPTCRNRIRRLPLHFSRNGPLCPA
CMKAVLRPEYSDKSLYTQLCFYRYIFDADCALEKLPEHEKDKLKKQFFTPRVLQDYRKVK
NIAEHFLSWSGYSEVNLSKLFANYAGKN
NT seq 4407 nt   +upstreamnt  +downstreamnt
atggcgcctgttcacggagacgactgcaaactggaaacaagcgctgtgtcagattcaggg
agttttgtagcttctcgagcacgtcgagaaaaaaaatcaaagaaaggacgccaagaagct
ttagagcgactgaaaaaggctaaagctggtgagaagtacaagtatgaagttgaggacctc
acaagtgtttatgaagaagttgatgaagagcagtattcaaaactggttcaggcacgtcag
gatgatgactggatcgtggatgacgacggtataggctatgtggaagacggtagagagatt
tttgatgacgaccttgaagatgatgcacttgacacctgtggggaaggaagtgatggcaaa
gcacacagaaaggacaggaaggatgtaaagaaaccttcagtgacaaaaccaaacaatatc
aaggcaatgttcattgctagtgctgggaagaaaaccacagataaaacagttgacttgtcc
aaggatgatctgctaggtgacattctacaggatctgaacactgagacacctcaaatagct
ccaccgccagtattgataccaaagaaaaaaagatctactggagcttcaccgaatcctttc
tctgtgcacaccgccacggcagttccttcaggaaaaattgcttcccctgtctccagaaag
gagcctccattaactcctgttcctcttaaacgtgctgaatttgctggcgatctggctcag
ccagagtgtccagaagatgagcaggagtcaggggttatagagtttgaagatggcgacttt
gatgagcccatggacacagaggaagtagatgaggaggagcctgtgactgccaagatttgg
gaccaagagagtgagccagtggaaggggtgaagcatgaggcagatcctgagacgggaacc
acatctttcttagacagttttctcccagatgtttcttgttgggacattgatcagaaggac
gaaaacagtttcttacttcaagaagttcaagtggactccaatcatctcccgttggtaaaa
ggggcagatgatgaacaagtctttcagttttattggctggatgcttatgaagatccatac
aaccaaccaggtgtggtttttctgtttggcaaagtatgggtcgaatcagccaaaacccat
gtgagctgttgtgttatggtgaaaaatattgagcgaacactctacttccttccccgtgaa
atgaaaattgacctaaacacagggaaagaaacagcaactccaattacaatgaaggatgtt
tatgaagaatttgattcaaaaatttcagcaaaatataaaataatgaagttcaagtccaag
atagtggaaaagaactatgcttttgagatacctgatgttccagaaaaatctgagtacttg
gaagttagatactcggcagaagtgccacagcttccacagaatttaaaaggagaaacattt
tctcatgtatttggaactaacacgtctagcttggaactgttcttgatgaatagaaagatc
aaaggaccctgttggcttgaagtaaaaaatccacaactcttgaatcaaccaatcagttgg
tgtaaatttgaggcaatggctttgaaaccagacttggtgaatgtaattaaggatgtcagt
cctcctccacttgtggtgatgtctttcagcatgaagacaatgcaaaatgtacagaaccat
caacacgagatcattgctatggcagcgctggttcatcacaatttcccattagataaagca
cctccaaaacctccctttcagacgcatttctgtgttgtgtctaaaccaaaggactgtatt
ttcccatgcgctttcaaagaagtcattaagaaaaagaatatggaggttgaggttgctgca
acagaaagaactttgctaggatttttccttgcaaaagttcacaaacttgaccctgatatt
ctcgtgggtcataatatttgtggttttgaactagaagtgctactgcaaagaattaatgag
tgcaaggttcctttctggtccaagataggtcggctgaggagatccaacatgccaaaactt
gggagccggagtggatttggtgaaagaaatgctacctgtggtcgaatgatatgtgatgtg
gaaatttcagtaaaagaattgattcattgtaaaagttaccatttgtctgaacttgttcag
cagattctgaaaactgagaggattgtaattccaacagaaaatatacgaaacatgtatagt
gaaccttctcatctgttgtacctgttggaacacatctggaaagatgccagattcattttg
cagatcatgtgtgagctaaatgttcttccattagcattgcagatcactaacatcgctggg
aacattatgtctaggacactgatgggtggacgatctgagcgaaacgagtttttgttgctt
catgcattttatgaaaacaactatattgtgcctgacaagcagattttcagaaaacctcag
caaaaaccgggagatgaagatgaagaaattgatggggataccaataaatataagaaagga
cgcaagaaagcagcttatgctggaggcttggttttggaccccaaagttggtttttatgac
aagttcattttgctcctggatttcaacagtttatatccttccatcattcaggaatttaac
atttgttttacaacagtgcaaagagttgcttcagagacactgaaagctacagaggatgag
gaacaagaacagattccagagttgccagatccaaacttagatatgggcattttgcccaga
gagatccggaaactggtagagcggagaaaacaagtgaaacagctaatgaaacagcaagat
ttaaatccagaccttgttcttcagtatgatatccgacagaaggctttgaagctcacagcg
aacagtatgtatggttgcctgggattttcgtacagcagattttatgctaaaccgctggct
gccttggtgacatacaaaggaagggagattttgatgcacacgaaagagatggtacagaag
atgaatcttgaagttatttatggagacacagattcaattatgataaataccaatagcacc
aacctggaagaagtctttaagttgggaaacaaggtaaaaaatgaagtgaataaattgtac
aaactgcttgaaatagacattgatggtgttttcaagtctctgctattgctgaagaaaaag
aaatatgctgctctagttgtcgaaccaacatccgatgggaattacatcaccaagcaggaa
ctgaaaggattggatatagttagaagggactggtgtgatcttgccaaggacaccggaaac
tttgtcattggccagattctttctgatcaaagtcgggacaccattgtggaaaacattcag
aagaggttaatagaaattggagaaaatgtgctaaacggcagtgtcccagtgagccagttt
gaaattaacaaggcattgacaaaggatccccaggattaccctgataaaaaaagtctacct
catgtacatgttgcactgtggataaattctcaaggaggcaggaaggtgaaagctggcgat
acagtgtcatatgttatctgtcaggatgggtcaaacctccctgcaactcagagggcctat
gcacccgagcaattgcagaaacaggacaatttagccatcgacacccagtactacttggcc
cagcagatccaccctgttgtggctcgaatctgtgagccaatagatggaattgatgctgta
ctcattgcattatggctaggacttgactccactcaatttagagttcatcagtatcacaaa
gatgaagagaatgatgctctccttggtggtccagcacagctaactgatgaagagaaatac
aaggattgtgaaaaattcaaatgcctttgtccttcatgtggaactgaaaatatttatgat
aatgtctttgaaggctcgggaatggatatggagcccagcttgaatcgttgcagtaatatt
gattgtaaggcttcaccagcgacctttatggtacagttgagcaacaaattgatcatggac
attagacgttgcattaaaaagtactatgatggctggttgatatgtgaggagccaacttgt
cgcaatcgcattcgtcgtcttccccttcatttctcccgaaatgggcctctgtgtccagcc
tgcatgaaagctgtgctcagaccagagtattctgacaagtccctgtacacccagctgtgc
ttttaccggtacatttttgatgcggactgtgcactggaaaaacttcctgaacacgagaaa
gataaattgaagaagcagtttttcactcccagagttcttcaggactacagaaaagtcaag
aacatagcagaacacttcttgtcctggagtggctactctgaagtaaacctcagcaagctc
ttcgccaattatgctgggaagaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (11)   
   RefSeq(nuc) (3)   
   GenBank (4)   
   EMBL (4)   
Protein domain (7)   
   Pfam (7)   
All databases (35)   

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