KEGG   Rattus norvegicus (rat): 85252
Entry
85252             CDS       T01003                                 
Symbol
Xpo1
Name
(RefSeq) exportin-1
  KO
K14290  exportin-1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03008  Ribosome biogenesis in eukaryotes
rno03013  Nucleocytoplasmic transport
rno03250  Viral life cycle - HIV-1
rno05164  Influenza A
rno05166  Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    85252 (Xpo1)
   03008 Ribosome biogenesis in eukaryotes
    85252 (Xpo1)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    85252 (Xpo1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    85252 (Xpo1)
   05164 Influenza A
    85252 (Xpo1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    85252 (Xpo1)
   03009 Ribosome biogenesis [BR:rno03009]
    85252 (Xpo1)
   03016 Transfer RNA biogenesis [BR:rno03016]
    85252 (Xpo1)
   03036 Chromosome and associated proteins [BR:rno03036]
    85252 (Xpo1)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     85252 (Xpo1)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    85252 (Xpo1)
  Pre-60S particles
    85252 (Xpo1)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    85252 (Xpo1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     85252 (Xpo1)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N DUF3385 Hydrolase_3 BspA_v
Other DBs
NCBI-GeneID: 85252
NCBI-ProteinID: NP_445942
RGD: 620517
Ensembl: ENSRNOG00000009935
UniProt: Q80U96 A6JQ67
Position
14:101434450..101476705
AA seq 1071 aa
MPAIMTMLADHAARQLLDFSQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPTCV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFETLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLLEKRLNLREALMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGSQHFDIPPRRQLYLTVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYVDTEIIMTKKL
QNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEE
YPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKIST
PLNPGSPVSNQMFIQDYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEERETALRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccagcaattatgacaatgttagcagaccatgcagcccgtcagctgcttgacttcagc
cagaagctggatatcaaccttttagacaatgtggtgaactgcttgtaccacggggaagga
gcccagcagagaatggctcaagaagtactgacacatctaaaggagcatcctgatgcctgg
acgcgcgtcgacaccattttggagttttcgcagaacatgaacacaaaatactatggacta
cagattttggaaaatgtgatcaaaacaaggtggaagatccttccaaggaaccagtgtgaa
ggaataaaaaaatacgttgttggtctcatcatcaagacatcctctgacccaacttgtgta
gagaaagaaaaggtgtatattgggaagttgaatatgattcttgttcagatacttaagcaa
gagtggcccaaacattggccaacttttatcagtgacattgttggagcaagtaggaccagt
gaaagcctatgtcaaaataatatggtgattcttaaactcttgagtgaagaagtgtttgat
ttctctagtggacagataacccaagttaaagccaagcatttaaaagacagcatgtgcaat
gagttttcacaaatattccagctttgccagtttgtgatggaaaactcccagaatgctccc
cttgtacatgctacattagaaacgctgctgagatttctgaactggattcccctgggatac
atcttcgagactaagttaatcagcaccttgatttacaagttcctgaatgttccgatgttc
cgaaacgtgtctctaaagtgcctcacggagattgctggtgtgagtgtgagccagtatgag
gagcagtttgaaactctgtttacacttacaatgatgcagctaaaacagatgcttccttta
aacactaatatccgacttgcatattcgaatgggaaagatgatgaacagaactttattcaa
aatctcagtctgtttctctgcaccttcctaaaggagcatggtcaacttctagagaaaagg
ctgaatctcagggaagcactcatggaggctcttcattacatgttgttggtgtctgaagtg
gaagaaactgaaatttttaaaatctgtcttgagtactggaatcacttggcagctgagctc
tacagagagagtccattttctacatctgcttctccattgttatctggaagtcagcacttt
gatattcctcctcggagacagctgtacttgaccgtgttatccaaggttcgtttattgatg
gttagtcgcatggctaaaccagaggaggtactggttgtagaaaatgatcagggagaagtt
gtaagagagttcatgaaggatactgattccataaatttgtataagaatatgagagaaaca
ttagtttatcttacccatctggattatgtagatacggaaataataatgactaagaaactt
caaaatcaagtgaatggtacagaatggtcatggaaaaatttgaatacactgtgctgggca
ataggctccatcagtggggcgatgcacgaggaggatgagaagcggttccttgtcactgtt
atcaaggacctcttaggattatgtgagcagaagagaggcaaggataataaagccatcatt
gcatcgaatatcatgtacatagtaggccagtacccacggtttctgagagcacactggaaa
tttttgaagacagtagtaaacaagcttttcgaattcatgcatgaaacccatgatggagtc
caggacatggcttgtgacacatttattaaaatagctcaaaaatgccgtagacattttgtt
caggttcaagttggagaagtaatgccgtttattgatgagattttaaacaacataaatact
ataatttgtgatcttcagcctcagcaggttcataccttttatgaagcagtggggtacatg
attggtgcacagacagaccagacagttcaagagcatttgatagaaaaatacatgctactc
cctaatcaagtatgggacagtataattcaacaggcaaccaaaaatgtggatatcctgaaa
gaccccgagacagtcaagcagctggggagcatactaaaaactaatgtgagagcctgcaag
gctgttggccacccctttgtgattcagctggggaggatttacttagacatgctcaatgtg
tacaagtgcctcagtgaaaacatttctgcagccattcaagctaacggtgagatggttaca
aagcaaccactgattagaagtatgcgaacagtaaaaagggaaactttaaagttaatatct
ggttgggtgagccgttccaatgatcctcagatggtagctgaaaactttgttcctcctctg
ttggatgcggttcttattgattaccagagaaatgttccagctgctagagagccagaagtg
ctcagtactatggccattattgtcaacaagctcggtggacatataacagctgaaatacct
cagatttttgatgcagtttttgagtgcacattgaatatgataaataaggattttgaagag
tatccagaacacagaaccaactttttcttgttacttcaagctgtcaattctcactgtttc
ccagcattccttgctattccacctgcccagttcaagcttgttttggattctattatttgg
gcttttaaacatactatgaggaatgtcgcagatacaggcttacagatactttttacactt
ttacaaaatgttgcacaagaagaagctgcagcgcagagtttttaccaaacgtacttttgt
gacattcttcagcatatcttttctgttgtgacagacacctcacatactgcgggtctaaca
atgcatgcatcaattctcgcatatatgtttaatttggttgaagaaggaaagataagcaca
ccgctaaatcccggaagtccagttagcaaccagatgtttattcaagactacgtggctaat
ctccttaagtctgcgttccctcacctacaagatgctcaagtaaagctctttgtgacagga
cttttcagcttaaatcaagatattcctgctttcaaagaacatctaagggatttcttagtt
caaataaaggagtttgcaggtgaagacacatcggatctatttttggaagagagagaaaca
gctcttcgacaggctcaggaggagaaacataaacttcaaatgtctgtacctggaatcctt
aacccacatgaaatcccagaagaaatgtgtgactaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (9)   
   Pfam (9)   
All databases (39)   

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