KEGG   Rattus norvegicus (rat): 85254
Entry
85254             CDS       T01003                                 
Symbol
Slc44a1
Name
(RefSeq) choline transporter-like protein 1 isoform 1
  KO
K06515  solute carrier family 44 (choline transporter-like protein), member 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05231  Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09161 Cancer: overview
   05231 Choline metabolism in cancer
    85254 (Slc44a1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    85254 (Slc44a1)
   04090 CD molecules [BR:rno04090]
    85254 (Slc44a1)
Transporters [BR:rno02000]
 Solute carrier family (SLC)
  SLC44: Choline-like transporter
   85254 (Slc44a1)
CD molecules [BR:rno04090]
 Proteins
  85254 (Slc44a1)
SSDB
Motif
Pfam: Choline_transpo
Other DBs
NCBI-GeneID: 85254
NCBI-ProteinID: NP_001029024
RGD: 621426
Ensembl: ENSRNOG00000055089
UniProt: Q8VII6 A0A0G2K0P8 A6KDP2
Position
5:72857323..73037279
AA seq 656 aa
MGCCSSASAAQSSKREWKPLEDRSCTDIPWLLLFVLFCIGMGFICGFSVATGAAARLVSG
YDSYGNICGQRNAKLEAIANSGLDHTHRKYVFFLDPCNLDLINRKIKSMALCVAACPRQE
LKTLSDVQKFAEINGSALCSYNIKPSEYTLTAKSSAFCPKLPVPASAPIPFFHRCAPVNI
SCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYISRVLV
WILTILVILGSLGGTGVLWWLYAKQRRSPKETVIPEQLQIAEDNLRALLIYAISATVFTV
ILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWAYWIMTLLFLGT
TGSAVQNEQGFVEYKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYFTRDKR
NLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACARCMLKS
CICCLWCLEKCLSYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVAAINTVGDFMLF
LGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDVLFLCF
AIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGAADARELKPMASGASSA
NT seq 1971 nt   +upstreamnt  +downstreamnt
atgggctgctgcagctccgcctccgccgcgcagagctccaaacgagaatggaagccgttg
gaggaccgtagctgcacagacataccatggctgctgctcttcgttctgttctgcattggg
atgggatttatttgtggcttttcagtagcaacaggtgcagcagcaagactagtgtcagga
tacgacagctatggaaatatctgtgggcagagaaatgcaaaactggaagcaatagcgaac
agtggcctggaccacacccaccggaagtatgtgttctttttggacccatgcaatctggac
ttgataaacaggaagatcaagtctatggcactgtgtgtagcggcatgtccacgacaggag
ttgaaaaccctgagtgacgtccagaagtttgccgagatcaatggttcagcactgtgtagc
tacaacataaagccttccgagtacactctgactgcaaaatcctctgccttttgccccaaa
ctaccagtaccagccagtgcacctattccattcttccatcgctgtgctcctgtgaacatt
tcctgctatgccaagtttgcagaggccctgatcacctttgtcagtgacaatagtgtctta
cacaggctgattagtggagtaatgaccagcaaagaaattatattgggactttgcttgtta
tcactagttctgtccatgattttgatggtgattatccggtatatctcaagagtgctagtg
tggatcctaacgattctggtcatcctgggttcactaggtggcaccggtgtactatggtgg
ctatatgcaaagcagagaaggtcccccaaagaaacagttattcctgaacagcttcagatc
gcggaagacaatctgcgggcgctcctcatctatgccatttctgctacggtgttcactgtc
attctcttcctgatcatgctggttatgcgtaaacgcgtcgctctcaccatcgccttgttc
cacgtggctggcaaggtcttcatacacctgcctctgctagtcttccagcccttctggact
ttttttgctctcgtcttattttgggcatactggataatgacacttctcttccttggcact
actggcagtgctgttcagaatgaacaaggtttcgtggagtacaaaatctctgggcctttg
cagtacatgtggtggtaccacgtggtcggcctgatttggatcagtgagttcattctcgcc
tgtcagcagatgactgtggcaggagctgtggtaacatactactttacaagggataaacgg
aatttgcctttcacacctattctggcatcagtgaaccgccttattcgttaccacctcggt
actgtggccaaaggatccttcattatcaccctcgtcaagatccccaggatgatccttatg
tatatccacagtcagctcaaagggaaggaaaacgcttgtgcacgatgcatgctgaaatcc
tgcatttgctgcctttggtgtcttgaaaagtgcctgagctacttaaaccagaatgcatac
acagccacagccatcaatagcaccaacttctgcacctcagcaaaggatgccttcgtcatt
ctagtggagaatgctctgcgagtggctgccatcaacacagtgggggacttcatgttattc
ctaggcaaggtgctgatagtctgcagcacgggcctggctgggattatgctgctcaactac
cagcaagattacacagtgtgggtgctgcctctcatcatcgtctgcctctttgctttccta
gtcgctcattgcttcctgtccatttacgaaatggtagtggatgtgttgtttttgtgtttt
gccattgatacaaaatacaatgatgggagcccaggccgagaattctatatggacaaagtc
ctaatggagtttgtggaaaacagtaggaaagcaatgaaagaagctggtaagggaggcgcc
gcggatgcccgagagctaaagccgatggcttcgggagcaagttctgcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (12)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (14)   
   RefSeq(nuc) (8)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (38)   

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