KEGG   Rattus norvegicus (rat): 85259
Entry
85259             CDS       T01003                                 
Symbol
Cnga1
Name
(RefSeq) cGMP-gated cation channel alpha-1
  KO
K04948  cyclic nucleotide gated channel alpha 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04022  cGMP-PKG signaling pathway
rno04024  cAMP signaling pathway
rno04744  Phototransduction
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04024 cAMP signaling pathway
    85259 (Cnga1)
   04022 cGMP-PKG signaling pathway
    85259 (Cnga1)
 09150 Organismal Systems
  09157 Sensory system
   04744 Phototransduction
    85259 (Cnga1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:rno04040]
    85259 (Cnga1)
Ion channels [BR:rno04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (CNG)
   85259 (Cnga1)
SSDB
Motif
Pfam: Ion_trans CLZ cNMP_binding MCU DUF2207_C Tim54 Connexin Ion_trans_2 CDC45 Sec62 SLC52_ribofla_tr GrpE ADI NPR3 RNA_pol_Rpc4 DDHD DUF4746 Hid1 Zip RR_TM4-6 Vfa1
Other DBs
NCBI-GeneID: 85259
NCBI-ProteinID: NP_445949
RGD: 621815
Ensembl: ENSRNOG00000004778
UniProt: Q62927
Position
14:35920948..35959065
AA seq 683 aa
MKTNIINTWHSFVNIPNVVVPAIEKEIRRMENGACSSFSDNDNGSLSEESENEDSLFRSN
SYRRRGPSQREHYLPGTMALFNVNNSSNKDQDPKEKKKKKKEKKSKADDKKESKKDPEKK
KKKEKEKEKKKEEKPKEKKEEEKKEVVVIDPSGNMYYNWLFCITLPVMYNWTMIIARACF
DELQSDYLEYWLIFDYVSDVVYLADMFVRTRTGYLEQGLLVKDKLKLIEKYKANLQFKLD
VLSVIPTDLLYFKFGWNYPEIRLNRLLRISRMFEFFQRTETRTNYPNIFRISNLVMYIVI
IIHWNACVYYSISKAIGFGNDTWVYPDVNDPEFGRLARKYVYSLYWSTLTLTTIGETPPP
VLDSEYVFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQSRVDAIKQYMNFRNVSKD
MEKRVIKWFDYLWTNKKTVDEREVLRYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLV
ELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISI
LNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLEEKGRQILMKDGLL
DINIANLGSDPKDLEEKVTRMEGSVDLLQTRFARILAEYESMQQKLKQRLTKVEKFLKPL
IETEFSALEEPGGESEPTESLQG
NT seq 2052 nt   +upstreamnt  +downstreamnt
atgaagacaaatattatcaatacgtggcactccttcgtaaatatccccaacgtggttgta
ccagctatcgaaaaggaaattcgacgcatggaaaatggggcgtgcagctcattttctgac
aatgacaatggctctctgtctgaagaatcagagaatgaggactctctctttagaagcaac
tcatacagaaggcgaggaccatcccagagggagcattacttgccaggcaccatggctctt
ttcaatgttaacaacagcagcaacaaagaccaagacccaaaggagaaaaagaaaaagaaa
aaggaaaagaagagcaaggccgatgataaaaaggaaagtaaaaaggacccagagaagaaa
aaaaagaaggaaaaggaaaaagagaagaaaaaggaggagaaacccaaagaaaagaaagaa
gaggagaaaaaagaggtggttgttattgacccttcaggaaacatgtactacaactggctg
ttttgtatcactttacctgtgatgtacaactggacgatgattattgcaagagcatgtttt
gatgaactccagtctgattacctagaatattggctcatttttgattacgtatcagatgta
gtctaccttgctgatatgtttgtacggacaaggacaggttacctggaacaagggttgcta
gtgaaagacaaactgaaactcatagagaagtacaaagcaaacctgcagtttaaacttgac
gttctgtcagtgataccgaccgacctgctgtatttcaagtttgggtggaactatccagaa
atcaggttgaaccggctgttaagaatctctcggatgtttgagttcttccagaggacagag
acaaggaccaactacccgaacatctttaggatctcaaaccttgtgatgtacattgtcatc
atcatccactggaacgcgtgtgtgtactactccatctcaaaagctattggatttgggaat
gacacatgggtctaccctgatgttaatgatcctgaatttggccgtttggctagaaaatac
gtctacagcctttattggtctaccttgactttgacgaccattggagaaaccccacccccc
gtgctggattccgagtatgtctttgtggtggtagacttcttaattggagttttaattttt
gccaccattgtcggtaacataggctccatgatttccaatatgaatgcagcccgggcagaa
tttcaatcaagagttgatgctatcaaacagtacatgaattttcgaaatgtgagcaaagac
atggaaaagagagttattaaatggtttgactacctgtggactaacaaaaagacagtcgat
gagagagaagttctgagatacctccctgacaaactcagggcagagattgccatcaatgtt
cacctagacacgttaaaaaaggttcgtatctttgctgactgtgaggctggtctgttggtg
gagttggtgttgaaattacaaccccaggtgtacagtcctggagattacatatgcaagaaa
ggggacattgggcgggagatgtacatcatcaaggaaggcaaacttgctgtggtggcagac
gacggaatcacacagtttgtggtgttgagtgacggcagctactttggcgagatcagcatt
cttaacatcaaaggcagcaaggctggcaaccgaagaacagccaatattaagagcattggc
tactcggacctgttctgcctctcaaaggatgacctcatggaagctcttacagagtaccca
gatgccaaaactatgttggaggagaaagggaggcagatcttaatgaaagacggtctactg
gatataaacattgcgaatttgggcagtgaccctaaagacctggaagagaaggtcactcga
atggaggggtcagtggacctcctgcaaacacgatttgcccgaatcttggctgagtatgaa
tcgatgcagcagaaactcaagcaaagattaaccaaggttgagaaattcttgaaaccactt
attgaaactgaattttcagcccttgaggaacccggaggagaaagtgaacccacagagtcg
ctacagggctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (21)   
   Pfam (21)   
All databases (45)   

Download RDF
DBGET integrated database retrieval system