KEGG   Rattus norvegicus (rat): 85432
Entry
85432             CDS       T01003                                 
Symbol
Ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
  KO
K14779  ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    85432 (Ddx52)
Enzymes [BR:rno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     85432 (Ddx52)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  90S particles
   Helicases
    85432 (Ddx52)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII P-loop_SecA AAA_19 HEM4
Other DBs
NCBI-GeneID: 85432
NCBI-ProteinID: NP_445977
RGD: 621743
Ensembl: ENSRNOG00000002612
Vega: OTTRNOG00000000496
UniProt: Q99PT0 A6HHJ6
Position
10:69322062..69344856
AA seq 598 aa
MDSYDLFRRLGAGAKFDVKRFSADATRFQVGKRKFGSDSSETVKGLDFFGNKKSVSDECG
GLQTQQELQNEETTEGGLLERSKEPKKKKRKKMTADVPAQEDLDGTIQWTSSVEAKLQDK
KANGEKKLTSEKLEHLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKISPRLLQN
ILDAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALV
ISPTRELASQIHRELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYL
LKQEPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSPKVRRAMFSATFAYD
VEQWCKLNLDNIVSVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFV
QSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFK
GVNLVINYDFPTSSVEYIHRIGRTGRAGNRGKAVTFFTEDDKPLLRSVANVIQQAGCPVP
EYIKGFQKLLSKQKKKMIKKPLERESISTTPKYFLEQAKQKKVAGQNSKKKETLKGKS
NT seq 1797 nt   +upstreamnt  +downstreamnt
atggattcctacgatctgtttcgccggctcggagccggcgccaagttcgacgtgaagcgg
ttctcagcagacgctactcgattccaggtaggaaaaagaaaattcggttctgattcttca
gagaccgtgaagggactagacttcttcggaaacaagaaatctgtctcagatgagtgtgga
ggattacaaacacagcaggagctccaaaatgaggagacaacagaagggggcctgctggaa
aggagtaaggagccgaagaagaaaaagagaaagaagatgactgcagacgttcctgctcaa
gaagaccttgacgggacgatacagtggacatcctctgtggaagcaaagcttcaagataaa
aaagccaatggagagaagaaattaacttcagaaaagttggagcatctcagaaaggaaaag
atcaacttctttcggaacaaacacaagatacatgtccaaggaactgatcttcctgaccca
attgctacatttcagcaacttgatcaagaatataagatcagtcctcgattgctccagaat
attctagatgcaggcttccaggtgcccacaccaattcagatgcaagccattccagttatg
ctgcatggtcgggaacttctggcttctgctcctactggatccgggaagacgttggcattt
agcatccccattttaatgcagctgaaacaacccacaaataaaggctttagagccctggtt
atatccccaacccgagaacttgccagccagattcacagagaattaattaaaatatctgag
ggtacaggattcaggatacatatgatccacaaagctgcaatagcagctaagaaatttgga
cctaaatcatctaagaagtttgatatccttgtgaccactccaaatcgactgatctacttg
ctgaagcaggagccgccagggatagacctaacaagtgttgagtggctggtagtagatgag
tcggacaaactgttcgaagatggcaaaactgggtttcgagaccagctggcttccattttc
ctggcctgcacatcccccaaggtcagaagagcaatgttcagtgcaactttcgcatatgac
gttgagcagtggtgcaagctcaacctggataacatagtttccgtatccattggagcaagg
aattctgcagttgaaactgttgaacaagagcttctgtttgttggatcggagactggaaaa
cttctggccatgagagaacttgttaaaaaaggcttcaatccacctgtccttgtttttgtt
cagtccattgaaagggctaaagagcttttccatgagctcatatatgaaggtattaatgtg
gacgtcattcatgcagaaagaacacagcagcagagagataacacagtccacagcttcaga
gcaggaaaaatctgggttcttatttgtacagccttgcttgcaagagggattgactttaaa
ggtgtaaacctggtcatcaattatgatttcccaaccagctcagtggaatacatccatagg
ataggtcgaactggaagagcagggaataggggaaaggctgttacatttttcaccgaagat
gataaaccattactaagaagtgttgccaatgttattcagcaggctggttgtcctgtacct
gaatacatcaaaggtttccagaaactactgagcaaacaaaagaaaaaaatgattaagaag
ccattggaaagggagagcattagtacaactccaaaatatttcttagagcaagctaaacag
aaaaaggttgctggccaaaacagcaagaagaaagaaactcttaaaggaaaaagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (12)   
   RefSeq(nuc) (2)   
   GenBank (5)   
   EMBL (5)   
Protein domain (6)   
   Pfam (6)   
All databases (34)   

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