KEGG   Rattus norvegicus (rat): 85489
Entry
85489             CDS       T01003                                 
Symbol
Twist1
Name
(RefSeq) twist-related protein 1
  KO
K09069  twist
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05205  Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    85489 (Twist1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    85489 (Twist1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
    85489 (Twist1)
SSDB
Motif
Pfam: HLH HTH_51 CDK5RAP3
Other DBs
NCBI-GeneID: 85489
NCBI-ProteinID: NP_445982
RGD: 621455
Ensembl: ENSRNOG00000011101
UniProt: Q9EPJ1
Position
6:56402309..56404303
AA seq 203 aa
MMQDVSSSPVSPADDSLSNSEEEPDRQQPASGKRGARKRRSSRRSAGGSAGPGGATGGGI
GGGDEPGSPAQGKRGKKSAGGGGGAGGGGGGGGSSSGGGSPQSYEELQTQRVMANVRERQ
RTQSLNEAFAALRKIIPTLPSDKLSKIQTLKLAARYIDFLYQVLQSDELDSKMASCSYVA
HERLSYAFSVWRMEGAWSMSASH
NT seq 612 nt   +upstreamnt  +downstreamnt
atgatgcaggacgtgtccagctcgccagtctcgccggccgacgacagcctgagcaacagc
gaggaggagccggaccggcagcagccggcgagcggcaagcggggggctcgcaagagacgc
agcagtcggcgcagcgcgggcggcagcgcggggcccggcggggccacgggcgggggcatc
ggaggcggcgacgagccgggcagcccggcccagggcaagcgcggcaagaaatctgcgggc
ggaggcggcggcgcgggcggaggcggcggcggcggcggcagcagcagcgggggcgggagc
ccgcagtcgtacgaggagctgcagacacagcgggtcatggccaacgtgcgggagcgccag
cgcacccagtcgctgaacgaggcatttgccgccctgcgcaagatcatccccacgctgccc
tcggacaagctgagcaagattcagaccctcaaactggcggccaggtacatcgacttcctg
taccaggtcctgcagagcgacgagctggactccaagatggcaagctgcagctatgtggcc
cacgagcggctcagctacgccttctccgtctggaggatggagggggcctggtccatgtcc
gcgtcccactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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