KEGG   Rattus norvegicus (rat): 85493
Entry
85493             CDS       T01003                                 
Symbol
Abcf1
Name
(RefSeq) ATP-binding cassette sub-family F member 1
  KO
K06184  ATP-binding cassette, subfamily F, member 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:rno03012]
    85493 (Abcf1)
Translation factors [BR:rno03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    85493 (Abcf1)
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_29 AAA_14 AAA_16 NACHT AAA RsgA_GTPase AAA_28 AAA_5 ABC_tran_Xtn AAA_24 MMR_HSR1 AAA_18 AAA_22 AAA_25 cobW AAA_23 ATP-synt_ab NB-ARC
Other DBs
NCBI-GeneID: 85493
NCBI-ProteinID: NP_001103353
RGD: 620286
Ensembl: ENSRNOG00000000799
Vega: OTTRNOG00000001552
UniProt: Q6MG08
Position
20:2807315..2820240
AA seq 839 aa
MPKGPKQQPPEPEWIGDGEGTSPADKVVKKGKKDKKTKKTFFEELAVEDKQAGEEEKLQK
EKEQQQQQQQQKKKRDTRKGRRKKDVDDDDDGDERVLMERLKQLSVPASDEEDEVPVPVP
RGRKKAKGGNVFEALIQDESEEEKEEEEEKPVLKPAKPEKNRINKAVAEEPPGLRNKKGK
EEKSKGKAKNKPSATDSEGEDDEDMTKEKEPPRPGKDKDKKGAEQGSEEEKEEKEGEVKA
NDPYAHLSKKEKKKLKKQMDYERQVESLKAANAAENDFSVSQAEVSSRQAMLENASDIKL
EKFSISAHGKELFVNADLYIVAGRRYGLVGPNGKGKTTLLKHIANRALSIPPNIDVLLCE
QEVVADETPAVQAVLRADTKRLRLLEEEKRLQGQLEQGDDTAAEKLEKVYEELRATGAAA
AEAKARRILAGLGFDPEMQNRPTQKFSGGWRMRVSLARALFMEPTLLMLDEPTNHLDLNA
VIWLNNYLQGWRKTLLIVSHDQGFLDDVCTDIIHLDTQRLHYYRGNYMTFKKMYQQKQKE
LLKQYEKQEKKLKELKAGGKSTKQAEKQTKEVLTRKQQKCRRKNQDEESQDPPELLKRPR
EYTVRFTFPDPPPLSPPVLGLHGVTFGYEGQKPLFKNLDFGIDMDSRICIVGPNGVGKST
LLLLLTGKLTPTNGEMRKNHRLKIGFFNQQYAEQLHMEETPTEYLQRGFNLPYQDARKCL
GRFGLESHAHTIQICKLSGGQKARVVFAELACREPDVLILDEPTNNLDIESIDALGEAIN
EYKGAVIVVSHDARLITETNCQLWVVEEQSVSQIDGDFDDYKREVLEALGEVMVNRPRD
NT seq 2520 nt   +upstreamnt  +downstreamnt
atgccgaagggtcccaagcagcagccgcccgagcccgagtggatcggggacggcgaaggc
acgagccccgcggacaaagtagtgaagaaaggcaaaaaagacaagaagaccaaaaagacg
ttctttgaggaactggcagtggaagacaagcaagccggggaagaggagaaactgcagaag
gagaaggagcagcagcagcagcagcagcaacagaagaaaaagcgagacaccaggaaaggt
cgtcggaagaaggatgtggatgatgatgatgatggtgatgagagagtgctcatggagcgc
cttaagcagctgtctgtgccagccagtgatgaggaagatgaggtacctgtccccgtgccc
cgaggacggaagaaggcaaagggcggaaatgtttttgaagccctgattcaggatgaaagt
gaggaggaaaaagaagaggaggaagaaaagcctgttctcaagcctgccaagccagagaag
aatcgcatcaataaggccgtggctgaggagcctcctgggctccgaaataaaaagggaaag
gaggagaaatcgaaagggaaagccaagaataaaccgtctgctacagacagtgaaggggaa
gatgatgaggacatgactaaagaaaaggagcctcccaggccagggaaggacaaagacaaa
aagggagctgagcagggttcagaggaagagaaagaagagaaggagggggaggtgaaggcg
aatgatccctatgcccaccttagcaaaaaggaaaagaaaaagctgaagaaacagatggat
tatgaacgccaggtggaatcattaaaggcagctaatgctgcagaaaatgacttctctgtg
tcccaggcagaggtgtcttcccgccaggcaatgttagaaaatgcatctgacattaagttg
gaaaagttcagcatctcggcccacggcaaggagctgtttgtcaatgctgacctgtacatc
gtggctggccgccgctatgggctggtggggcccaacggcaagggcaagaccacacttctg
aagcacattgccaaccgtgccctgagtatcccccctaacattgatgtgctgctgtgcgag
caggaggtggtggctgatgaaacaccagccgtgcaagctgttcttcgtgcagacacaaag
cgactgaggttgctagaggaggagaaacggcttcagggacagctggagcagggggatgat
actgccgctgagaaactagaaaaggtatatgaggaactgcgagctactggggcagcagct
gcagaggccaaggcacggcggatcctggctggcttgggctttgaccctgagatgcagaat
cggcccacacagaagttctctgggggttggcgaatgcgtgtctccctggccagggcactg
ttcatggaacccacactgctgatgctggacgagcctaccaatcacctggacctcaatgcc
gtcatctggctcaataactaccttcagggctggaggaagacactgctgatcgtctcccac
gaccagggctttctggatgatgtctgcaccgatatcatccacctggacactcagcggctc
cattactacaggggcaattacatgaccttcaagaagatgtaccagcagaagcagaaggag
ctgctgaagcagtacgagaaacaggagaagaagctgaaggagctgaaggctgggggcaag
tccaccaagcaagcggaaaagcaaacaaaggaagtcctgactcgaaaacagcagaaatgc
cgaaggaaaaaccaggatgaggagtctcaggatccccctgagcttctgaagcgccccagg
gagtacactgtgcgattcaccttcccagaccccccacctctcagcccacctgtcctgggg
ctgcatggtgtgacgtttggctacgaggggcagaagccactctttaagaacctggatttc
ggcatcgacatggactcccgaatttgcattgtgggtcccaatggtgtggggaagagcaca
ctactcctgttgctgactggcaagctgacaccgaccaacggggaaatgaggaagaaccat
cggctgaaaatcggcttctttaaccagcagtatgcagagcagctgcacatggaggagacg
cccaccgagtacctgcagcggggcttcaacctgccctatcaggatgcccggaagtgcttg
ggccgcttcggcctggagagccacgcccacaccatccagatctgcaaactctcgggcggg
cagaaagcccgagttgtgtttgcggagctggcctgtcgggagcctgatgtcctcatcttg
gatgaaccaaccaataacttggacatagagtccatcgatgccctgggagaggccatcaac
gagtacaagggagctgtgatcgttgtcagccatgatgcacgcctcatcacagaaaccaac
tgccagttgtgggtcgtggaggagcagagtgtcagtcaaattgatggtgactttgatgac
tacaagcgagaggtgttggaggccctgggtgaagtcatggtcaaccgacctcgggattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (16)   
   RefSeq(nuc) (2)   
   GenBank (7)   
   EMBL (7)   
Protein domain (21)   
   Pfam (21)   
All databases (51)   

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