KEGG   Rattus norvegicus (rat): 89868
Entry
89868             CDS       T01003                                 
Symbol
Sec16b
Name
(RefSeq) protein transport protein Sec16B
  KO
K20353  COPII coat assembly protein SEC16
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    89868 (Sec16b)
Membrane trafficking [BR:rno04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    89868 (Sec16b)
SSDB
Motif
Pfam: Sec16_C Sec16
Other DBs
NCBI-GeneID: 89868
NCBI-ProteinID: NP_446023
RGD: 621658
Ensembl: ENSRNOG00000005229
Vega: OTTRNOG00000000156
UniProt: Q75N33
Position
13:72206778..72260733
AA seq 1057 aa
MELWVPQTQGRTTGPSRDANRRLQSGHYRPRPHPQYSGDNYHQWQDTHKNSKPQQDPRDD
HQQPHYVPRSGEWSQPVSGADYLKGSYPSHPYSRSGYEDPYQSYHTPTPRDEYAYGNYYY
HGHPQLPQGERVARQGSPYIWHEDHRDQRHFSEHHWEKHNSTFEANSDTQFQFTSKNPYN
DNPASAFGLEQPGEFFPESGAQKQKPSLTSKSNLLQQHESGLSSSSYELSQYMTEAPEQY
EPMVSATWRPIQADDTSATVPKAPMRFYVPHVSVSFGPGGQLICVSPNSPADGQTALVEV
HSMEVILNDFEDQEEMRAFPGPLIREDIHKVDIMTFCQKKAAQCLKSETPGSRDSALLWQ
LLVLLCRQNGSMVGSDIAELLMQDCKKLEKYKRQPPVANLINLTDEDWPVLSSGTRNLLT
GEIPLNVDTPAQIVEKFTNLLYYGRKKEALEWAMKNHLWGHALFLASKMDPRTYNWVMSG
FTTTLALNDPLQTLFQLMSGRIPQAATCCGDKQWGDWRPHLAVILSNQAGDAELYQRAIV
SMGDTLAGKGLVEASHFCYLMAHVPFGHYTVKTDHLALVGSNHSQEFLKFATIEAIQRTE
IFEYCQMLGRPKSFIPSFQVYKLLYASRLADYGLASQALHYCEAIGAAVLSEGGSSHPVL
LAELIKLAEKLKLSDPLVLESRRGDRVLEPDWLVQLRRKHKELEQTRTGDLRDPDLTPSD
IYGARGTTDTPYRDLYGQQNYSEDSEYSSALWPTSEQTSLTNPTPQQPFPLQRDTYSERD
GPVHMGTPVPLYSVPATHLTVISGSSSGSGVAVTGAPGGRVGEEMLQKHPALGENTVPQE
AVQDPDGLAVISSPQTPLAPRDRSFSEDSAISAKEDEEGTSDGADKPPHPDASQKEKLRD
GKNTKSSGFGWFSWFRSKPASSVSTSGDEDSVDSSDSEESPRASPPHHASLGLSPTPPLS
SPSLPGASTFPRGTGGNSLQGSSNSSGMAEGVGIGGFSGPQGVSSEFYSQPGALPPPPTL
QGAVPLYNPSQVPQLPTASSLNRPNRLAQRRYPSQPC
NT seq 3174 nt   +upstreamnt  +downstreamnt
atggaactttgggttcctcagacacaaggaaggaccacgggaccatcaagggatgcaaat
agaagacttcagagtggacattatagaccccgtcctcaccctcagtacagcggagataac
taccaccaatggcaggatacccacaagaactcaaagccacagcaggaccccagggatgac
caccaacagccacactatgtacccaggagtggggagtggtcccagcctgtgtctggagct
gactacttgaaaggatcttatcccagtcacccatactcaaggtcaggctacgaggacccc
tatcagagctaccacactccgacaccgagggatgagtacgcttatggaaattactactac
cacgggcatccacagctgccgcaaggagaaagagtggcaaggcaagggagtccttatatc
tggcatgaagatcacagagaccaaaggcacttcagtgagcatcattgggaaaagcacaac
agtacatttgaagcaaacagtgacacccaattccaatttaccagtaagaatccatacaat
gacaaccctgcttccgcgtttggactggagcagcctggggagttctttccagagagtgga
gcccagaaacaaaagccatcgttgaccagcaaatccaaccttctccaacagcacgagtct
gggctcagctctagtagctatgagctcagtcagtacatgaccgaggcccctgagcagtat
gaacctatggtgtcagcaacttggaggcctattcaagctgatgacacctcagcgaccgtt
cccaaggcacccatgaggttctacgttccccacgtgtctgtgagctttgggccaggaggc
cagctgatatgtgtgtcccccaactctcctgctgatggacaaacggcccttgttgaagtg
cacagcatggaggttatacttaatgattttgaggatcaagaggagatgagagctttccca
gggcccctcatcagggaggacatacacaaggtggatatcatgacattttgtcagaagaaa
gcagctcagtgtctcaaatctgagacgccagggagcagggactcagctctgctttggcaa
ctgctggttctcctttgtcgacagaatgggtccatggtggggtctgacattgccgagctg
ctgatgcaagactgcaagaagctggagaagtacaagaggcagccccctgtagccaacctc
atcaacctgactgacgaggactggccggtgctgagttctgggactcgcaacctgctcact
ggggagattcccctcaacgtggatacgcctgcgcagatcgtggagaaattcaccaatctg
ctctactatggaaggaagaaggaggccttggaatgggctatgaagaaccacttgtggggc
catgccttgttcctagccagtaagatggatccaaggacctacaactgggtcatgagtggc
ttcaccactacgctggcgctcaatgaccctctgcagaccctcttccagctcatgtcagga
aggattccacaagcagccacgtgttgtggagacaaacagtggggagactggcggccccat
ttggctgtgatcctgtcaaatcaggccggagacgcagagttgtaccagcgagcgattgtc
agcatgggggacaccctggctggaaaagggcttgtggaggcatctcacttctgctacctc
atggctcacgtgcccttcggccactatacggtgaagacagaccatctggccttggtgggc
agtaaccacagtcaagagtttttgaaatttgcaacaattgaggctatccagcggacggaa
atcttcgagtactgccagatgctgggccgccccaaatccttcatcccgtccttccaggtg
tataagctcctttatgcttcccgtctggcagattacggcctggcatcccaagccttgcat
tactgtgaagccattggtgcagctgtcctgagcgagggagggagcagtcaccccgtgcta
ttagcggagctcatcaagcttgcagagaaactgaagctgtcggatcctctggttttagaa
agccgccgtggggacagggtcctggaaccggattggcttgtgcaactgcggaggaagcac
aaggaactggagcaaactagaactggagacctcagagatcctgatctgactccttcagat
atttatggagccagaggaacaacagacactccctaccgcgatctttatggccagcaaaac
tactcagaagactctgagtacagctcagccttgtggccaacatctgagcagacaagcctg
accaatcccaccccacagcagcctttccccctgcagcgagatacctactcagagagagat
ggcccagtacacatggggaccccagtgcctctttactcagttcctgcaacccacctgaca
gtgattagtggctccagtagtggcagcggtgtggcagtgacaggggctcctggaggaagg
gttggagaggagatgctgcagaaacatcctgcccttggagagaacacagtgcctcaagaa
gccgtgcaggatcctgatggtctagcagtcatttccagtcctcagacaccactggctccc
agggatcgaagtttttctgaggattctgccatttcagccaaggaggatgaggagggcact
tctgatggagcagacaaaccacctcaccctgacgcttcacagaaagaaaagctgagagat
gggaagaatacaaagagctctggattcggctggttcagctggtttcgatcaaagcctgcc
agcagtgtgtccacctctggagatgaagactctgtggacagttctgactcagaggagtct
cccagagcatcacctcctcaccatgccagcctgggcctctcaccaacacctcctctctca
tccccatctctgccaggtgccagcaccttcccgagaggcacaggtgggaatagtctccag
ggatcctcaaacagcagtggaatggctgaaggcgtggggattggagggttctcggggcca
cagggcgtttcttctgagttctactcccagcctggtgccctgcctcctccacctaccttg
caaggtgctgttcctctctacaatccatctcaggtccctcagcttcccactgctagtagc
ctgaaccggccaaaccgcctagcccagcgccgctacccaagccaaccatgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (15)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (13)   
DNA sequence (15)   
   RefSeq(nuc) (13)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (42)   

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