KEGG   Rickettsia prowazekii Madrid E: RP371
Entry
RP371             CDS       T00018                                 
Symbol
RP371
Name
(GenBank) LYSYL-tRNA SYNTHETASE (lysS)
  KO
K04566  lysyl-tRNA synthetase, class I [EC:6.1.1.6]
Organism
rpr  Rickettsia prowazekii Madrid E
Pathway
rpr00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rpr00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    RP371 (RP371)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rpr01007]
    RP371 (RP371)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rpr03016]
    RP371 (RP371)
Enzymes [BR:rpr01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     RP371 (RP371)
Amino acid related enzymes [BR:rpr01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   RP371 (RP371)
Transfer RNA biogenesis [BR:rpr03016]
 Prokaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    RP371 (RP371)
SSDB
Motif
Pfam: tRNA-synt_1f tRNA-synt_1b Anticodon_2 tRNA-synt_1g tRNA-synt_1e tRNA-synt_1 DUF903
Other DBs
NCBI-ProteinID: CAA14830
UniProt: Q9ZDF8
Position
451670..453256
AA seq 528 aa
MSVVLEDAIRSNAWPFIEAKKILDSLNGKAPEKGYILFETGYGPSGLPHIGTFAENARMV
MVQKAFEQLSDIPTKLICFSDDMDGLRKVPSNIPHPEMVAQYMDMPLTSIPDPFGKCKSY
GHYMNAKLCAFLDKFGFKYEFYSSTNCYKAGMFDEMLIRVLEKYDEIMALMLPTFRDERK
TTYAPFMPICPKTGKVLQVPIEKWDAKAGTVSYKDEDGNDVEVPVTGGHCKLQWKPDFGM
RWAALKVDYEMYGKDHLANSRLYSEICRILGGKPPVQFCYELFLDANGEKISKSRGNSIS
VDDWLKYASVESIALFMYKNPARAKRLFFDLIPKNVDEYITLNQKYHLEEDMVTRFANPV
YHIHHGNVPKIETFGLTYSLLLNLTAVCNTSDKSVLWGFITKYEPKATPNTSTYLDHLTE
FAIRYYNDFIQTHKSYLVVSEKHKIILHDILDMLSNISDQTEEESIQKAIYDIGMKSGYE
NLRYYFKDLYQILLGQNEGPRLGTFIKLYGVEETKKLVEEKLLCHTVA
NT seq 1587 nt   +upstreamnt  +downstreamnt
atgtcagtagttttggaagatgctattaggtcgaatgcttggccttttattgaagctaag
aagatattagacagtttaaatggtaaagctcctgaaaaaggttatatattatttgaaact
gggtatggtccttcaggtttacctcatataggaacttttgctgaaaatgctcgtatggtg
atggtacagaaagcatttgaacaattatctgatattccgactaaactaatttgcttttct
gatgatatggatggactgcgtaaagttcctagtaatataccacatcctgaaatggtagcg
cagtatatggatatgcctcttacatctatacctgatccattcggtaaatgtaaaagttat
gggcattatatgaatgcaaagctttgtgcattccttgataaattcggttttaagtatgaa
ttttatagcagtactaactgttataaagctggtatgtttgatgaaatgttgataagagtt
ttagagaaatatgatgagataatggcgctaatgttaccaacttttagagatgagcgaaaa
actacctatgcacctttcatgcctatctgcccgaaaacaggtaaagtgttgcaagtccct
atagaaaagtgggatgctaaggcaggtacagtatcttataaagacgaggacggtaatgat
gtagaagtaccagtaactggagggcactgtaaattacaatggaagccagattttggtatg
cgttgggctgcacttaaagtcgattacgaaatgtacggtaaagaccatttggcaaatagt
agactttattcggagatttgtcggatcttaggaggtaagccgcctgtgcagttctgttat
gagctctttttagatgcaaacggtgagaaaatctctaaatcaagaggtaatagtattagt
gttgatgattggcttaaatatgcttctgttgaaagtatagcattatttatgtataaaaat
ccagctagagctaagcgtttattttttgatttaattcctaaaaatgttgatgaatatatt
actttgaatcagaaatatcatttggaggaggatatggtaacacgttttgcaaatcccgtt
tatcatatacatcacggaaatgttccaaaaattgagacttttggtcttacatattcgttg
cttttgaatcttactgctgtatgtaatacttcagataaatcagtactttgggggtttatt
actaaatatgaacctaaagcgactccaaatactagtacttatcttgaccatttaacagaa
tttgctataagatattataatgactttattcaaacacataaatcatatttagttgtttct
gaaaagcataagattattttacatgatatattagatatgttatctaatatatctgatcaa
acagaagaggaaagcattcagaaagcaatatatgatattggaatgaaatcaggatatgaa
aatctgcgttattactttaaagatctatatcaaatattacttgggcaaaatgaagggcca
agacttgggacttttatcaagctttacggagtggaagaaacaaagaagttagttgaagaa
aaattactatgtcatacagtagcttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (60)   

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