KEGG   Rickettsia typhi Wilmington: RT0163
Entry
RT0163            CDS       T00193                                 
Symbol
holB
Name
(GenBank) DNA nucleotidyltransferase (DNA-directed)
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
rty  Rickettsia typhi Wilmington
Pathway
rty03030  DNA replication
rty03430  Mismatch repair
rty03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rty00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RT0163 (holB)
   03430 Mismatch repair
    RT0163 (holB)
   03440 Homologous recombination
    RT0163 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rty03032]
    RT0163 (holB)
   03400 DNA repair and recombination proteins [BR:rty03400]
    RT0163 (holB)
Enzymes [BR:rty01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RT0163 (holB)
DNA replication proteins [BR:rty03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RT0163 (holB)
DNA repair and recombination proteins [BR:rty03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RT0163 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2
Other DBs
NCBI-ProteinID: AAU03647
UniProt: Q68XJ5
Position
203347..204141
AA seq 264 aa
MTILKPLIIELLEFHLKYNKLYNSWLIEAGNIEQALQDLEEFIYIKLFKSNIMLENNPDY
YFVARDNAKNISIGQIRKLQDFLNKTSAISGHKVAVIYTADFMNLNAANACLKILEDAPK
NSYIFLITSRAASIISTIRSRCFKVNIRAPLPNVRNDLYLQFIQPIADNKTLDFINRFTT
KDRELWLGFIENLLLLMNRILKKSANFNIDLLDLENKIFNKLNKNPSYLLQKFTDIKELI
YNTIDYDLDLKTSYILVVNEFFTV
NT seq 795 nt   +upstreamnt  +downstreamnt
ataacaatattaaaaccattgataattgaactactagagtttcacttaaaatataataaa
ctatataatagttggcttattgaggcagggaatatagagcaagctttacaagatttagaa
gagtttatatatattaagctttttaaaagcaacatcatgcttgaaaataatcctgattat
tattttgttgctcgagataatgctaaaaatatttctattggacaaatacgaaaattacaa
gacttcttaaataagacttctgcaatttcaggtcataaagttgctgtaatttatactgct
gattttatgaatttgaatgctgcaaatgcatgtttaaaaattcttgaagatgcaccaaaa
aatagttacatttttttaattacttcaagagctgcaagtattatatctacaattagatca
agatgttttaaagttaatattagagctcctctacctaatgttagaaatgatttatatctt
cagtttattcaaccgatagcagataataaaacgttagattttattaatcgttttactact
aaagaccgagaattatggttaggttttattgaaaatttattattattaatgaatagaatc
cttaaaaaatctgctaactttaatattgatcttctagatttagaaaataaaatttttaat
aaactgaataagaatccttcatatttactacaaaaatttactgatataaaagagttaata
tacaataccattgattatgatttggacttaaaaacaagttatatattagtagtgaatgag
ttttttacagtgtaa

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