KEGG   Rickettsia typhi Wilmington: RT0193
Entry
RT0193            CDS       T00193                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
rty  Rickettsia typhi Wilmington
Pathway
rty03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rty00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RT0193 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rty03400]
    RT0193 (uvrB)
DNA repair and recombination proteins [BR:rty03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RT0193 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      RT0193 (uvrB)
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD Kinesin AAA_30 AAA_7 Microtub_bd AAA_22 DUF87 UB2H AAA_5 P-loop_SecA
Other DBs
NCBI-ProteinID: AAU03677
UniProt: Q68XG5
Position
complement(244545..246533)
AA seq 662 aa
MNNFSIISAYKPAGGQPKAIDEIIAGLNSKKRSQMLLGITGSGKTFTMANIIERTNRPTL
IMAHNKTLAAQIYLEMKSIFPKNAVEYFVSYYDYYQPEAYIVRTDTFIEKDSSINEQIDL
MRHSATRSLLERRDVIVIASVSCIYGLGAPDLYYQMTVHLELGQSYPRDKLLNDLINLQY
KRNDIGFERGCFRVKGDHIDIFPSHYSDKAWRLSFFGNELEYIHEFDPLTGEKLTQLDKA
MVFGNSHFVMPQKTINNAISSIEVELQKHLDVLKSQDKLIEAKRLNQRTQYDLEMLTETG
SCKGIENYSRFFTGRNAGEPPPTLFEYLPKDALLFLDESHVSIPQIRAMYNSDRARKEVL
VEHGFRLPSALDNRPLKFEEWEKFRPQTVFVSATPGPFELEETGGTVVELIIRPTGLLDP
ECIIKPATNQVEDLISEIQTTITKGLRILVTTLTKKMAEDLTSYLQDLQYKTYYLHSNIH
TLERIEILRDLRQGNIDILVGINLLREGIDIPECGLVAILDADKEGFLRSEVSLIQTIGR
AARNSRGKVILYADKMTKSIDKAVSETLRRRQIQQEYNKKYGIIPKTINSAIHTLESLEE
IHDNKLDKKQTNTLLNNPAKLKSYMDKLKKEMFKAASNLEFEQAAKLRNQLKTLEKAVLE
LS
NT seq 1989 nt   +upstreamnt  +downstreamnt
atgaataatttttctattatctcagcatataaaccagcaggcggtcaaccaaaagcaata
gatgaaattatagcagggttaaatagtaaaaaacgctcacaaatgttgcttggtattaca
ggatcaggtaaaacttttactatggcaaatattatagaaagaactaatagacctactctt
attatggctcataataaaactttagctgcacaaatctatttagaaatgaaatcaattttt
ccaaagaatgcagttgaatattttgtctcatattatgattattatcagccagaagcttat
atagtacgcactgatactttcatcgaaaaagattcatcaattaatgaacagattgattta
atgcgtcattctgctacaagatcgttattagaacgtcgtgatgtgatagtaattgcgtct
gtttcgtgtatttatggacttggcgctcctgatttatattatcagatgactgtgcattta
gaacttggtcaaagctatcctcgtgataagttactaaatgatttaataaatctgcaatat
aaacgtaatgatatcggatttgagcgtggctgttttagggttaaaggcgaccacattgat
atttttccctcacattatagcgataaagcttggcgtttatcatttttcggtaatgaactc
gaatatattcatgaatttgacccattaacaggtgagaaacttactcagcttgataaagct
atggtttttggtaattcacactttgttatgccacaaaaaacaataaataatgcaatatca
agcattgaggtagagttgcaaaaacacttagatgtcttaaagtcacaagataaactaatt
gaagcgaaaagactaaaccagcgtactcaatatgatcttgaaatgttaacagaaacaggt
agctgtaaaggaattgaaaactactctcgctttttcacaggacgtaatgccggtgagcct
cctcctacattattcgagtatttacctaaagatgctttattgtttcttgatgaaagccat
gtatcaataccacaaattagagcgatgtataacagcgatcgagcacgaaaagaagtgttg
gtagagcatggatttcgtttaccttctgcacttgataacagacctttaaaatttgaagaa
tgggaaaaatttagaccacaaactgtgtttgtatctgcaactccgggaccattcgaatta
gaagagacaggtggcactgtagtagagctgattatcagacctacaggacttctagatcct
gaatgtattatcaaaccagctactaaccaagttgaggatttaattagcgaaattcaaaca
actatcactaaaggtttacgtatcttagtcactacattaacaaaaaaaatggctgaagat
ttaacatcctatttgcaggatctgcaatataaaacatattatttgcattccaatatacat
actctagaacgtattgaaatattaagagatttaagacaaggtaatatcgatattttagta
ggtattaatctattaagagaggggattgatattcctgagtgcggtttagttgcgatactt
gatgcagacaaagagggatttttacgatctgaagtatcactaatacaaacaataggaaga
gctgcaagaaatagtagaggtaaagttatactttatgcagataaaatgactaaatctata
gataaagctgttagtgaaacattacgtagaagacaaattcaacaggaatataataaaaaa
tatggtataattccaaaaactatcaatagtgctattcatactttagaatcacttgaagaa
atccatgataataaactcgataaaaaacaaactaatactttattgaataatcctgctaaa
ctaaaatcttacatggataaattaaaaaaagaaatgtttaaagctgcaagtaatcttgaa
tttgaacaagctgcaaaactccgtaaccaactcaaaactctagaaaaggcagtactggag
ttaagctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (15)   
   Pfam (15)   
All databases (24)   

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