KEGG   Rickettsia typhi Wilmington: RT0196
Entry
RT0196            CDS       T00193                                 
Symbol
gyrA
Name
(GenBank) DNA gyrase
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
rty  Rickettsia typhi Wilmington
Brite
KEGG Orthology (KO) [BR:rty00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rty03032]
    RT0196 (gyrA)
   03400 DNA repair and recombination proteins [BR:rty03400]
    RT0196 (gyrA)
Enzymes [BR:rty01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     RT0196 (gyrA)
DNA replication proteins [BR:rty03032]
 Prokaryotic type
  DNA Topoisomerases
   RT0196 (gyrA)
DNA repair and recombination proteins [BR:rty03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      RT0196 (gyrA)
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C
Other DBs
NCBI-ProteinID: AAU03680
UniProt: Q68XG2
Position
250064..252781
AA seq 905 aa
MTDKYSSNLVPVNIEDEMKASYLDYAMSVIVSRAIPDVRDGLKPVHRRIIYSMYEAGNHA
SKPYRKSARIVGDVMGKYHPHGDSAIYDSLVRMTQDFSLRLPLVDGQGNFGSMDGDAAAA
MRYTESRMSKVAHKLVEDIDKGTVSFNINYDGSEEEPSVLPAMFPNLLVNGSGGIAVGMA
TNIPPHNLGEIIDACCLYIDNNDIEILDLLEVVKGPDFPTGSMILGISGIRSAYLTGRGS
IIMRGKAEIENIGNSRQAIIITEIPYMVNKARLVEKIAEMVKEKRIEGISDLRDESNKNG
VRIFIELKKDVVAEVVLNQIYACTQLQTNFGVIMLALKDGLPKVMNLKEVIAAFVSFREV
VITNRTIYLLNKARDRAHILLGLAIAISNIDEIIYIIKASNDTNLAKQELMDRQWEVLDI
LPLIKLVDDKVMLNERGKLSFTEVQAKAILEMKLQRLTAMEKNKLEQDLKHLATEIAEYL
NILDSRTRLLEILKEELIKVKEEFAVPRLTAIEFGEFDQDIEDLIQREEMVVTVTLGGYI
KRVPLSSYRSQKRGGKGRSGLSMRDEDITMQVFVGSTHTPMLFFSNIGKVYSLKLYKLPL
SNPQGKGRPMVNILPLQENEHITNIMPLPENQDEWDHLNIMFATAKGNIRRSDLLDFKKI
QLNGKIAIRLDEDDKLIDVKPCKEDEHILLATKAGKALRFPVESLRIIKSRISDGVRGMK
LAKEDSVISMTVLKGINSTKEDRDAYLTVPWEKRLKIAKGEEFNLEALGVHLNADSILEM
ANSEEFILTVTENGFGKRSSAYGYRITDRGGSGIINMDINDKTGLVVGVMPVKMDDELML
ITNSGKLIRCKLESVRITGRNTSGVILFKLDDDEKVVSVSLIAETSESGEDSELVEDGLE
SAENM
NT seq 2718 nt   +upstreamnt  +downstreamnt
gtgactgataaatattcttctaatttagtaccggtaaatatcgaagatgagatgaaagca
tcttatcttgattatgctatgagcgttatagtaagtagagctataccagatgttcgtgat
ggtttaaagcctgtgcatcgcagaattatctattccatgtatgaagccggtaatcatgct
agcaaaccttatagaaaatctgcacgaatagttggtgacgttatgggtaaataccatcct
catggtgatagtgctatttatgattcgttagtacgtatgactcaagatttttctttgcgt
ctgccgcttgtagatggacaaggtaatttcggctcaatggatggtgatgcagcggctgcg
atgagatatactgaatctcgcatgtctaaagttgcacataagcttgtagaggatattgat
aaaggaactgtcagttttaacattaattatgacggttctgaagaagagccatccgtacta
cctgcaatgtttcccaatttattggttaatggtagtggaggtattgcagttggtatggca
actaacattccgcctcataatcttggtgagattattgatgcgtgctgtttatatatagat
aataatgatatagaaatattagatttactagaagttgttaaaggaccagatttccctaca
ggatcaatgattttaggcattagtggtattagatctgcatatcttactggtagaggtagt
atcattatgcgcggtaaagctgagattgagaacatcggtaatagccgtcaagcaattatt
attactgaaataccgtatatggtcaataaagcaaggcttgttgaaaaaattgctgaaatg
gttaaggaaaaacgtatagaaggtataagtgatttacgcgatgaatcgaataaaaatggt
gtaaggatttttattgagttaaagaaagacgtagttgcagaagtagtcttaaatcaaata
tatgcatgtactcagctacaaactaactttggtgttattatgctcgctcttaaagacggg
ttaccgaaagtgatgaatttaaaagaagtaattgcagcttttgttagttttagagaagtg
gtaattactaatcgtactatatatttgctaaataaagcaagagatagagcacatatttta
ctagggttggctattgccattagtaatatagatgaaataatatatattattaaagcttca
aatgatacgaatttagctaaacaagaattaatggatagacagtgggaagtattagatatc
ttacctcttataaaattggttgatgataaagtaatgttaaatgagcgaggtaaattgagt
tttactgaggtacaagctaaagcaatcttagaaatgaagctgcaacgtctaactgctatg
gagaaaaacaagcttgaacaagatttaaaacacctcgctacggagattgccgaatatctt
aatatactcgactctcgtacaaggttacttgaaattttaaaagaagagctaattaaagtt
aaagaagaatttgcagttcctcgtcttactgcgattgaattcggtgagtttgatcaagat
atagaagatttaattcagcgtgaagaaatggtcgtaacagtaacgcttggtggttatatc
aaacgtgtacctttaagtagctatcgttcacaaaaacgtggaggtaagggtagatctggt
ctttcaatgcgagatgaggatattaccatgcaagtttttgtcggtagtactcatacgcca
atgttatttttctcaaatataggtaaggtttatagcttgaagctttataaattaccttta
agtaatccgcaaggtaagggtagaccaatggttaatatattaccattgcaagaaaatgaa
catattacaaatatcatgccgttaccagaaaatcaggatgagtgggatcatttaaatatt
atgttcgcaactgcaaaaggtaatatcagaagaagtgacttattagattttaaaaagatt
cagttaaatggtaaaattgctattaggcttgatgaagacgataaattaatagacgtaaaa
ccatgtaaagaagatgagcatattttacttgctaccaaagcaggtaaagctttaagattt
cctgttgaatctttgcgtattattaagagtcgtatttctgatggggtgcgcggtatgaag
cttgctaaagaggattctgtaatttctatgactgtacttaaaggcattaacagtacaaaa
gaggatagagatgcttatttaacagtaccatgggaaaaaaggcttaagatcgctaaaggt
gaggagtttaaccttgaagcattaggtgtacatttgaatgcagattcgattttagaaatg
gccaattcggaagaattcatcttgacagttacagagaacggttttggtaaaagaagctcg
gcatatggttatagaattactgatcgtggtggtagtggtataataaatatggatattaac
gataaaacaggtttagtcgttggtgtgatgccagttaaaatggatgatgagttaatgctg
atcacaaatagtggtaagttaattcgctgtaaacttgagtcggtacgtattacgggtcgt
aacactagtggtgtaattctgtttaaattagatgatgatgaaaaagtagtatctgtttct
ttaatagctgaaacttctgaaagcggagaagatagtgaattagtggaagatggattagag
agtgctgaaaatatgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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