KEGG   Rickettsia typhi Wilmington: RT0375
Entry
RT0375            CDS       T00193                                 
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
rty  Rickettsia typhi Wilmington
Pathway
rty03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rty00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    RT0375 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rty03400]
    RT0375 (ruvB)
Enzymes [BR:rty01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RT0375 (ruvB)
DNA repair and recombination proteins [BR:rty03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     RT0375 (ruvB)
    RecFOR pathway proteins
     RT0375 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 Mg_chelatase AAA_14 TIP49 RNA_helicase NB-ARC AAA_16 AAA_22 nSTAND3 bpMoxR Bac_DnaA AAA_18 AAA_3 Parvo_NS1 DUF815 AAA_24 Rad17 AAA_17 Sigma54_activ_2 ABC_tran AAA_28
Other DBs
NCBI-ProteinID: AAU03852
UniProt: Q68WZ0
Position
475073..476101
AA seq 342 aa
MTNILSPEKSENDQELPIRPSYLQEFVGQQQIKENLLVFIKAAKSRNEHLDHTLFYGPPG
LGKTTLAKIISNEIGGNFKSTAGPAIIKAADLAAILTNLEKNDVLFIDEIHRLNTLVEEI
LYSAMEDFELDIIIGEGSAARSVKITLPKFTLIGATTRFGMLSNSLRDRFGIPMRLNFYN
TEELKQVLNRASKLLDIDLTDSGSEEIAKRSRGTPRIALRLLRRIRDFAVVDGKLRIDKE
ICDFGLKRLTVDSIGLDSNDYRYLKFIADNYHGGPVGIETIAAALSEQRDELEETIEPYL
IKIGLVKRTPRGRVITIAAFEHLKMPIPNKSQHQFNILNENE
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgactaatatattatcacctgagaaaagtgaaaatgatcaagaattgccaataaggcca
tcatatttgcaagagtttgttggtcaacagcaaattaaagaaaatcttttagtatttatt
aaggctgcaaaatctcggaatgagcatcttgaccatactttattttatggtccaccaggg
cttggcaagactacacttgctaagattatatctaatgaaatcggtggtaattttaaatct
actgccggtcctgctataattaaagcggctgatcttgctgctattcttaccaatcttgaa
aaaaatgatgtattatttattgatgaaatccaccgcctaaacaccttagttgaagaaata
ttatattctgctatggaagattttgagcttgatataattattggtgaaggatctgctgca
aggtcagtgaaaataacgttaccgaaatttactttaatcggtgctactacccgcttcggg
atgcttagtaattctttgcgtgataggttcggtattccaatgcgtttaaatttttataat
actgaagaattaaaacaagttttaaatagagcaagtaaactacttgacattgatttaaca
gattctggttctgaagaaatagctaaaagaagtagaggaacaccgagaattgctttaagg
ttattgcgtcgtataagagattttgcagtagttgatggtaaattaagaatagataaagaa
atttgtgattttgggttaaagcgtttaacagttgatagcataggacttgatagtaatgat
tatcgttatctaaaattcatagctgataattatcatggtggtcctgtaggaattgaaacg
atagcagcagcactttctgaacagcgtgatgaacttgaagaaactatagagccttatctt
ataaagataggtttagtaaaaagaactcctagaggtagggtaataacaattgcagctttt
gagcatttgaaaatgccaataccgaataaatcacagcatcaatttaatattttaaacgag
aatgaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (25)   
   Pfam (25)   
All databases (36)   

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