KEGG   Rickettsia typhi Wilmington: RT0377
Entry
RT0377            CDS       T00193                                 
Symbol
dacF
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
  KO
K07258  serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
Organism
rty  Rickettsia typhi Wilmington
Pathway
rty00550  Peptidoglycan biosynthesis
rty01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rty00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RT0377 (dacF)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rty01002]
    RT0377 (dacF)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rty01011]
    RT0377 (dacF)
Enzymes [BR:rty01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     RT0377 (dacF)
Peptidases and inhibitors [BR:rty01002]
 Serine peptidases
  Family S11: D-Ala-D-Ala carboxypeptidase A family
   RT0377 (dacF)
Peptidoglycan biosynthesis and degradation proteins [BR:rty01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   RT0377 (dacF)
SSDB
Motif
Pfam: Peptidase_S11 Beta-lactamase2 Beta-lactamase CytoC_RC
Other DBs
NCBI-ProteinID: AAU03854
UniProt: Q68WY8
Position
479212..480132
AA seq 306 aa
MFRRFLLPYIFIVIFCFAPISEAKKIVKKTNKYPVQTSLVIDAKNGKVLQAHNAQVRIYP
ASLTKLMTLYLMFEAIESGKLSLDKKLLVSAKASKMPHCKLGLRAGDNITVRDAINGLII
KSANDVAVTVAEGMKGSEKSFAHLMNVKAKTLGMKHTFFKNASGLHDPLQQTTARDIAKL
AIALKRDYPKYYPFFSKTSFVFRGNVINGHNSVTKHYQGAEGMKTGFHTPAGYNLVTTAS
RKNKSLIAVITGAKSAASRDQKMIRLLDHHFGVKTINYKPSIKLASNNKANTKAKSKIIK
RKNIRS
NT seq 921 nt   +upstreamnt  +downstreamnt
atgtttagaagatttttactaccttatatctttattgtaatattttgttttgctcctata
agcgaagcaaaaaaaattgtcaaaaagaccaataaatatcctgtacaaactagtttagta
attgacgcaaaaaatggtaaagttctgcaagcacataatgcccaagttcgaatttatcct
gcttctttaactaagttaatgactctatatttaatgtttgaagcaatcgaatcaggtaag
ttatctttagataaaaaattacttgtatcagcaaaagcttcaaaaatgccacattgtaaa
cttggtttaagagcaggtgacaatatcactgttagagatgcaattaatggattaatcata
aaatctgctaatgatgttgcagtaacggtcgctgagggtatgaaaggttcagaaaaatcg
tttgctcatttaatgaatgtgaaagctaaaacattaggtatgaagcacacattttttaaa
aatgcttcaggtttgcatgatccacttcaacaaactactgcaagagatatagctaaactc
gctattgcacttaaaagagattacccaaaatattatccattcttttctaaaactagtttt
gtatttcgtgggaatgtcataaatggacataatagtgttactaaacattatcaaggtgct
gaaggtatgaaaacaggatttcatactcctgcaggttataatttagtaactactgcttct
cggaagaataaatcattgatcgcagttattactggcgctaaaagtgcagcatctcgtgat
caaaaaatgatcagattattagatcaccattttggtgttaaaactataaattataaacct
tcaattaaacttgcctctaataataaagctaatacaaaagcgaaatcaaaaataataaag
aggaagaatatacgtagttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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