KEGG   Rickettsia typhi Wilmington: RT0396
Entry
RT0396            CDS       T00193                                 
Symbol
murD
Name
(GenBank) D-glutamate ligase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
rty  Rickettsia typhi Wilmington
Pathway
rty00470  D-Amino acid metabolism
rty00550  Peptidoglycan biosynthesis
rty01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rty00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RT0396 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RT0396 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rty01011]
    RT0396 (murD)
Enzymes [BR:rty01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     RT0396 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:rty01011]
 Precursor biosynthesis
  Amino acid ligase
   RT0396 (murD)
SSDB
Motif
Pfam: Mur_ligase_M MurD-like_N Mur_ligase_C RET_CLD3
Other DBs
NCBI-ProteinID: AAU03873
UniProt: Q68WW9
Position
501879..503252
AA seq 457 aa
MNAYTKQKIGIFGLGKTGISVYEELKNKYDLIVYDDLKAKRDIFEKLFGNKLITILSDSR
WQDLDKIVLSPGVPLTHEVVRIAHHFNIPIISDIDLLFEKSKNLKFIAITGTNGKSTTAA
LISHILNSNGLDYTVAGNIGVPALQAKASKDGYVLELSSFQLDLVKIFTVKVAVLLNITP
DHLDRYQDMNGYIAAKAKIFDRMDKDSYAVINIDNDYCRKIFLLLQREQLIKLIPFSVTK
ILNNGISIVDDKIHDNNLTYKLPLNKNLQGLHNCENIAASYAVSKIIGVESKKILESISS
FQSLHHRMQYIGSINNISFYNDSKATNAISALQSIKALDNIYWLAGGIPKEGGIEGIKPY
FNKIKKAYFYGQAKTMFANTAKNIIDCVICDNLEYAFNIAYKDAVSDNTEIKNILLAPSC
SSYDQFKNFEERGELFIKLSKNVIGSNYLLSNLRIFD
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgaatgcatatacaaaacaaaaaataggtattttcgggcttggtaaaacaggaatatct
gtttatgaagaactgaaaaataaatatgatttaattgtttatgatgatttaaaagcaaag
agagatatatttgaaaaattgtttggaaataaacttattactattttatctgattcaaga
tggcaagatttagataaaattgtcttaagtcctggagttccgcttacgcatgaagtagta
agaattgctcatcattttaatattccaattatttcagatatagatttattatttgaaaag
tcaaaaaacttaaaatttatagctataaccggtacaaacggtaaaagtactactgctgct
ttaataagtcatatcttaaatagtaacggtttagactatactgttgctggtaatattgga
gttcctgctttacaagctaaggcaagtaaagacgggtatgtacttgaattatcttctttt
cagctagatttagtcaaaatctttacagttaaagttgcagtgcttcttaatataactcct
gatcatttagatagatatcaggacatgaacggttatattgcagcaaaagctaaaattttt
gatcgaatggataaagatagttatgcagtaattaatattgataatgattattgtcgtaaa
atttttttgctattacagagagagcagttgataaaattaattccattctcagttactaaa
attcttaacaatggtatatcaatagttgatgataaaattcacgataataatttaacttat
aaattgcctttgaataaaaatttgcaagggctgcataattgtgagaatatagctgcaagt
tatgcagtatctaaaataataggagtagaatctaaaaaaatacttgagtccataagtagt
tttcaaagcttgcatcatagaatgcaatatattggtagtataaataatataagtttttat
aatgatagtaaagcgacaaatgctatatctgcattacaatcaattaaagcactagataat
atttattggcttgctggaggtatccctaaagagggtggtattgagggaataaaaccttat
tttaataaaattaaaaaagcttatttttatggtcaagctaaaacaatgtttgcaaatact
gctaagaatataatagattgtgtaatatgtgataatcttgagtatgctttcaatattgct
tataaggatgcagtaagtgataatacggagataaaaaatatcttgttagcaccaagttgt
agctcgtatgaccaatttaaaaattttgaggagcgtggtgagttgtttatcaagttatca
aaaaatgtcattggaagtaattatttactaagcaatctcaggatatttgattag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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