KEGG   Rickettsia typhi Wilmington: RT0401
Entry
RT0401            CDS       T00193                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
rty  Rickettsia typhi Wilmington
Pathway
rty00300  Lysine biosynthesis
rty00470  D-Amino acid metabolism
rty01100  Metabolic pathways
rty01110  Biosynthesis of secondary metabolites
rty01120  Microbial metabolism in diverse environments
rty01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:rty00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RT0401 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RT0401 (dapF)
Enzymes [BR:rty01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     RT0401 (dapF)
SSDB
Motif
Pfam: DAP_epimerase S_layer_C Fer2
Other DBs
NCBI-ProteinID: AAU03878
UniProt: Q68WW4
Position
510908..511720
AA seq 270 aa
MINKINFVKMHGLGNDFVIVHKRDLATVCNLSQLAKNMADRHTGIGCDQCIIYEEYNNVY
TMIIYNIDGSNAKLCGNATRCLAKLIYLDTGKKDITIMVGKKKLLCNVEAANKISVNVGN
VSFNETWMPSRDRIWAFAERYMLDLKETMCVDIGNPHLIIFSKLEPQDQKIIGQKLQAKE
LFVDGVNVNFAEVKDNKIYLSVWERGAGLTLACGSGACGSFAAGLKLGFVHSPSTVVFKY
GNLIMQEEDGNIIMQGEATFVMRGEYYCEK
NT seq 813 nt   +upstreamnt  +downstreamnt
atgattaataaaattaactttgtaaaaatgcatggtcttggtaatgattttgtgattgtt
cataaacgggatttagccactgtatgcaatttatcgcaattagccaaaaatatggctgat
cgtcatacaggtattggttgtgatcagtgtattatttatgaagagtataataatgtttat
acaatgattatatacaacatagacggatctaatgctaaattatgcggtaatgctacacga
tgtttagcaaagttaatttatcttgatacaggaaagaaagatattacaataatggtaggc
aagaaaaaattgttatgtaatgtggaagctgcaaataagattagtgtgaatgtaggaaac
gtgagttttaatgaaacttggatgccaagccgtgatagaatttgggcatttgcagagcgt
tatatgcttgatttaaaagaaacgatgtgtgttgatataggtaatccacatttaattatt
tttagtaaattagaaccgcaagatcaaaaaattatcggtcaaaaattacaggctaaagaa
ttatttgtagatggagtaaatgtgaattttgctgaagtaaaagataataaaatttattta
tctgtttgggagcgaggagcagggttaacgcttgcttgcggtagtggagcttgcggtagt
tttgctgctggtttaaagcttgggtttgtccattcaccaagtacggtagtatttaagtac
ggtaatcttatcatgcaagaagaagatggtaatataataatgcaaggagaagcaaccttt
gtaatgcgtggagaatattattgtgagaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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