KEGG   Saccharomyces cerevisiae (budding yeast): YBR278W
Entry
YBR278W           CDS       T00005                                 
Symbol
DPB3
Name
(RefSeq) DNA polymerase epsilon noncatalytic subunit
  KO
K03506  DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03030  DNA replication
sce03410  Base excision repair
sce03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    YBR278W (DPB3)
   03410 Base excision repair
    YBR278W (DPB3)
   03420 Nucleotide excision repair
    YBR278W (DPB3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sce03032]
    YBR278W (DPB3)
   03400 DNA repair and recombination proteins [BR:sce03400]
    YBR278W (DPB3)
Enzymes [BR:sce01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     YBR278W (DPB3)
DNA replication proteins [BR:sce03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    YBR278W (DPB3)
DNA repair and recombination proteins [BR:sce03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      YBR278W (DPB3)
SSDB
Motif
Pfam: CBFD_NFYB_HMF TFIIF_beta_N
Other DBs
NCBI-GeneID: 852580
NCBI-ProteinID: NP_009837
SGD: S000000482
UniProt: P27344
Structure
Position
II:760294..760899
AA seq 201 aa
MSNLVKEKAPVFPISKVKKIAKCDPEYVITSNVAISATAFAAELFVQNLVEESLVLAQLN
SKGKTSLRLSLNSIEECVEKRDNFRFLEDAIKQLKKNSALDKKRELNMQPGRSDQEVVIE
EPELHEDDGVEEEEEEDEVSEEEEPVHNEELLDDSKDQQNDKSTRSVASLLSRFQYKSAL
DVGEHSDSSDIEVDHTKSTDP
NT seq 606 nt   +upstreamnt  +downstreamnt
atgtccaacttagttaaagaaaaagcacctgtctttcctatatctaaagtaaagaagatt
gccaaatgcgaccccgaatacgtaattacatctaatgtagctatatcagcgaccgcattc
gctgctgagttatttgtacagaatctcgtcgaagaatcgctggtcttagcacaactgaat
tcgaaaggaaagacaagcctacgattaagcctaaattctatagaagaatgtgtcgaaaaa
agagataatttcaggtttctagaggatgccattaaacaactgaagaagaatagcgcactc
gacaagaagagagaactaaacatgcaaccgggtcggagcgatcaagaggttgttatagaa
gagcctgaattgcatgaggatgatggtgtagaggaagaagaagaagaagacgaggtatcc
gaagaagaagagcccgtacacaatgaagaacttcttgatgatagtaaagatcaacaaaat
gataaatccacgcgcagtgtggcaagcttgctgtcgagattccagtataaatccgcacta
gacgtaggagaacactccgactcttctgatatcgaagttgaccatacgaaaagcaccgat
ccttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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