KEGG   Saccharomyces cerevisiae (budding yeast): YJL138C
Entry
YJL138C           CDS       T00005                                 
Symbol
TIF2
Name
(RefSeq) translation initiation factor eIF4A
  KO
K03257  translation initiation factor 4A
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:sce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sce03019]
    YJL138C (TIF2)
   03012 Translation factors [BR:sce03012]
    YJL138C (TIF2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sce04147]
    YJL138C (TIF2)
Messenger RNA biogenesis [BR:sce03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     YJL138C (TIF2)
   mRNA cycle factors
    Stress granule specific factors
     YJL138C (TIF2)
Translation factors [BR:sce03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    YJL138C (TIF2)
Exosome [BR:sce04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   YJL138C (TIF2)
  Exosomal proteins of bladder cancer cells
   YJL138C (TIF2)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_30
Other DBs
NCBI-GeneID: 853303
NCBI-ProteinID: NP_012397
SGD: S000003674
UniProt: P10081
Structure
Position
X:complement(153504..154691)
AA seq 395 aa
MSEGITDIEESQIQTNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGH
DVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIK
VHACIGGTSFVEDAEGLRDAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGF
KEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVN
VEEEEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERD
TIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVA
INFVTNEDVGAMRELEKFYSTQIEELPSDIATLLN
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgtctgaaggtattactgatattgaagaatcccaaattcaaaccaactatgacaaggtc
gtctacaagttcgatgatatggaattggacgaaaacttgttaagaggtgttttcggttac
ggtttcgaagaaccatctgccattcaacaacgtgccatcatgcctattattgaaggtcac
gatgtcttggctcaagctcaatctggtactggtaagaccggtactttctccattgctgct
ttgcaaagaattgacacctctgtcaaggctcctcaagctttgatgttggctccaactaga
gaattggctttgcaaatccaaaaggttgtcatggctttggctttccacatggacatcaag
gtccacgcttgtatcggtggtacttcctttgttgaagacgctgaaggtttgagagatgct
caaatcgtcgttggtactccaggtcgtgtttttgacaacatccaaagacgtagattcaga
actgacaagatcaagatgttcatcttagatgaagctgatgaaatgttgtcttctggtttc
aaggaacaaatctaccaaattttcaccttacttccaccaaccactcaagttgttctattg
tccgccaccatgccaaatgacgtcttggaagttaccaccaaatttatgagaaacccagtt
agaattttggttaagaaggatgaattgactttggaaggtatcaaacaattctacgttaat
gttgaagaagaagaatacaaatacgagtgtttgaccgatttatacgactctatctccgtt
actcaagctgtcatcttctgtaacaccagaagaaaggtcgaagaattgaccactaagtta
agaaacgacaaatttaccgtttctgccatctattctgatttaccacaacaagaaagagac
accatcatgaaggaattcagaagtggttcttccagaattttgatctccactgatttgttg
gctagaggtatcgatgtccaacaagtttctttggttattaactacgacttaccagctaac
aaagaaaactatattcacagaatcggtagaggtggtcgtttcggtagaaagggtgttgcc
atcaactttgttactaacgaagacgttggcgctatgagagaactagaaaagttctactcc
actcaaattgaagaattgccatccgacattgctaccttgttgaactaa

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Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (158)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (1)   
   RefGene (153)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (6)   
   PDB (6)   
Protein domain (5)   
   Pfam (5)   
All databases (178)   

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