KEGG   Streptomyces coelicolor: SCO1478
Entry
SCO1478           CDS       T00085                                 
Symbol
SC9C5.02c
Name
(RefSeq) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
sco  Streptomyces coelicolor
Pathway
sco03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SCO1478 (SC9C5.02c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sco03021]
    SCO1478 (SC9C5.02c)
   03400 DNA repair and recombination proteins [BR:sco03400]
    SCO1478 (SC9C5.02c)
Enzymes [BR:sco01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SCO1478 (SC9C5.02c)
Transcription machinery [BR:sco03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SCO1478 (SC9C5.02c)
DNA repair and recombination proteins [BR:sco03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SCO1478 (SC9C5.02c)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 1096904
Kitasato: SCO1478
Position
complement(1580546..1580818)
AA seq 90 aa
MSSSISAPEGIINPPIDELLEATDSKYSLVIYAAKRARQINAYYSQLGEGLLEYVGPLVD
THVHEKPLSIALREINAGLLTSEAIEGPAQ
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgtcctcttccatctccgcgcccgagggcatcatcaacccgccgatcgacgagctcctc
gaggccacggactcgaagtacagcctcgtgatctacgcggccaagcgggcccgccagatc
aatgcgtactactcgcagctcggcgagggcctcctcgagtacgtcggtccgctcgtcgac
acccacgtgcacgagaagccgctctcgatcgccctgcgcgagatcaacgcggggctgctg
acctccgaggccatcgagggcccggcgcagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   KITASATO (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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