KEGG   Streptomyces coelicolor: SCO3961
Entry
SCO3961           CDS       T00085                                 
Symbol
SCD78.28c, serS
Name
(RefSeq) seryl-tRNA synthetase
  KO
K01875  seryl-tRNA synthetase [EC:6.1.1.11]
Organism
sco  Streptomyces coelicolor
Pathway
sco00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:sco00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SCO3961 (SCD78.28c)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sco01007]
    SCO3961 (SCD78.28c)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sco03016]
    SCO3961 (SCD78.28c)
Enzymes [BR:sco01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.11  serine---tRNA ligase
     SCO3961 (SCD78.28c)
Amino acid related enzymes [BR:sco01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   SCO3961 (SCD78.28c)
Transfer RNA biogenesis [BR:sco03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    SCO3961 (SCD78.28c)
 Prokaryotic type
    SCO3961 (SCD78.28c)
SSDB
Motif
Pfam: tRNA-synt_2b Seryl_tRNA_N
Other DBs
NCBI-GeneID: 1099397
Kitasato: SCO3961
Position
complement(4360548..4361825)
AA seq 425 aa
MIDLRLLREDPDRVRASQRARGEDVALVDSLLSADERRRSSGVRFDELRAEQKGLGKLIG
KAAGDEKAELLKRAEQLKTDVKAADAERDAADAETQELLQRLGNLVHPDVPVGGEEDFVT
LETHGTHRDFAAEGFEPRDHLELGQLLGAIDVERGAKVSGSRFYFLTGVGALLELALVNA
AIAQATAAGFTPMLTPALVRPQSMAGTGFLGQAAQDVYHLDKDDLYLVGTSEVPLAAYHM
DEILDGDRLPLRYAGFSPCFRREAGSHGKDTRGIFRVHQFDKVEMFSYVLPEDSQAEHQR
LLEWEKQWLTSLELPFRVIDVASADLGSSAARKYDCEAWIPTQGKYRELTSTSDCTEFQS
RRLSIRVREGKKVRPLATLNGTLCAVPRTIVAILENHQQADGSVRVPEVLRPYLGGREVL
EPVAK
NT seq 1278 nt   +upstreamnt  +downstreamnt
gtgattgaccttcgcctgctccgtgaggaccccgaccgtgtgcgcgcctcgcagcgcgcc
cgtggagaggacgtcgcgctcgtcgactccctcctgtccgccgacgaacggcgcaggtcg
tccggcgtccgcttcgacgagctgcgcgccgagcagaagggcctcggcaagctgatcggc
aaggccgccggagacgagaaggccgagctgctcaagcgggccgagcagctcaagaccgac
gtcaaggccgccgacgccgagcgcgacgcggccgacgccgagacccaggagctgctccag
cggctcggcaacctcgtccaccccgacgtgcccgtcggcggcgaggaggacttcgtcacg
ctggagacgcacggcacgcaccgcgacttcgccgccgagggcttcgagcccagggaccac
ctggagctgggccagctgctcggcgccatcgacgtggagcgcggcgcgaaggtctccggc
tcgcgcttctacttcctgaccggcgtgggcgccctcctggagctggcgctggtcaacgcg
gcgatcgcgcaggccacggcggccggcttcacgccgatgctgaccccggcactggtgcgc
ccgcagtcgatggccggcaccggcttcctcggccaggccgcccaggacgtctaccacctc
gacaaggacgacctgtacctggtcggcacgtccgaggtgccgctcgccgcgtaccacatg
gacgagatcctggacggggaccgcctgccgctgcgctacgccggcttctcgccctgcttc
cgccgcgaggcgggctcgcacggcaaggacacccggggcatcttccgcgtgcaccagttc
gacaaggtcgagatgttctcctacgtcctccccgaggactcgcaggccgagcaccagcgc
ctgctggagtgggagaagcagtggctgacgtcgctggagctgccgttccgggtgatcgac
gtggcctcggccgacctgggctcctcggccgcgcgcaagtacgactgcgaggcgtggatc
ccgacccagggcaagtaccgcgagctgacctcgacctcggactgcaccgagttccagtcc
cgccggctgtcgatccgcgtccgcgagggcaagaaggtgcgcccgctggccacgctcaac
ggcacgctgtgcgccgttccgcgcaccatcgtggcgatcctggagaaccaccagcaggcc
gacggctcggtccgcgttcccgaggtgctgcgcccgtacctgggcggccgggaggtcctg
gagccggtggccaagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-Gene (1)   
   KITASATO (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system