KEGG   Streptomyces coelicolor: SCO5188
Entry
SCO5188           CDS       T00085                                 
Symbol
2SC3B6.12
Name
(RefSeq) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
sco  Streptomyces coelicolor
Pathway
sco03420  Nucleotide excision repair
sco03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SCO5188 (2SC3B6.12)
   03430 Mismatch repair
    SCO5188 (2SC3B6.12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sco03400]
    SCO5188 (2SC3B6.12)
Enzymes [BR:sco01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SCO5188 (2SC3B6.12)
DNA repair and recombination proteins [BR:sco03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SCO5188 (2SC3B6.12)
   MMR (mismatch excision repair)
    Other MMR factors
     SCO5188 (2SC3B6.12)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 HRDC UvrD_C_2 AAA_30 DUF6011 Viral_helicase1 C1_1 GHL13
Other DBs
NCBI-GeneID: 1100629
Kitasato: SCO5188
Position
5644716..5647073
AA seq 785 aa
MRSHGVNVRGGTTIPVAHSHRVMPVALIRLSVRACGQPTHPSRETWQHGGVTAATHSTLF
PQVPDSADAVLEGLDLEQREVATALRGPVCVLAGAGTGKTRAITHRIAYGVRAGILQPSS
VLAVTFTNRAAGEMRGRLRQLGASGVQARTFHSAALRQLQYFWPKAIGGSLPRLVDRKIQ
LVADAAAACRIRLDRGELRDVTAEIEWSKVTQTVPADYAPAAAKAGREAPRDPAEIAQLY
AAYEDLKRARSVIDFEDVLLLTVAVLQDRHDVAEQVRAQYQHFVVDEYQDVSPLQQRLLE
LWLGDRDDLCVVGDASQTIYSFTGATPDHLLDFRGRHPGATVVKLVRDYRSTPQVVHLAN
GLLAQARGRAADHRLELVSQRPAGPEPGYAEYSDEPAEAEGAARRIRELIDSGVPAAEIA
VLFRTNSQSETYEQALADAGVPYQLRGAERFFDRPEVRKAGSALRAAARFGGNDSLLDDA
VDLPSQVRAVLSGEGWTTQPPAGSGAVRERWESLAALVGLAQDFAAARAGATLSDLVVEL
DERAGAQHAPTVQGVTLASLHSAKGLEWDVVFLVGVAEGMMPITYAKTDEQIEEERRLLY
VGVTRARERLHLSWALARSPGGRPNRRPSRFLKGLRPGSGTAGGQAAAAGAGGVERGIRG
GGGGGAAAAPRRTQRTPARCRVCGRTLTDAGEMKLMRCEGCPSDMDEGVYERLREWRAVQ
AGRSGQPAFCVFTDKTLMAIAESVPEDERELARIPGVGMRKLNRYGTDVLAICAGQEGVG
LDEDD
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgaggtcgcacggagtgaacgtccgtggcggcacgaccattcccgtcgcgcactcgcac
cgcgtgatgcctgtcgcattgatacgactgtcagtgcgtgcctgtggacaaccgactcac
ccgtcccgcgagacctggcagcatggcggtgtgacagcagcaacgcactccaccctcttc
ccgcaggtaccggactcggccgacgcggtgctcgaagggctcgacctcgagcagcgcgag
gtggcgaccgccctgcgcggcccggtgtgcgtgctggcgggagccggcacgggcaagacc
cgcgcgatcacccatcgcatcgcctacggggtgcgcgccgggatcctccagccttccagc
gtgctcgccgtcaccttcaccaaccgtgcggccggcgagatgcgcggtcggctgcgccag
ctcggcgcctccggtgtgcaggcccgcaccttccactcggcggcgctgcgacagctccag
tacttctggccgaaagcgatcggcggttccctgccccggctcgtcgaccgcaagatccag
ctcgtcgccgacgcggccgccgcctgccgcatccgcctcgaccgcggcgagctgcgtgac
gtcaccgcggagatcgagtggtccaaggtgacccagacggtgcccgccgactacgccccg
gcggctgccaaggccggccgtgaggcgccccgcgacccggcggagatcgcgcagctgtac
gccgcctacgaggacctcaagcgtgcgcgctccgtcatcgacttcgaggacgtgctgctg
ctgacggtggccgtcctccaggaccggcacgatgtcgccgagcaggtccgcgcccagtac
cagcacttcgtggtcgacgagtaccaggacgtcagccccttgcagcagcgtctgctggag
ctgtggctcggggaccgcgacgacctgtgcgtggtcggcgacgccagccagacgatctat
tcgttcacgggagcaacccccgaccatctgctcgacttccgcggccgccaccccggcgcc
accgtcgtcaagctggtccgcgactaccgttccaccccccaggtcgtccacctcgccaac
ggcctgctcgcccaggcccggggccgggccgccgatcaccgcctggagctggtctcccag
cggcccgcgggccccgagcccggctacgccgagtactccgacgagccggccgaggccgag
ggcgccgcccgccgcatccgcgaactcatcgactcgggcgttccggccgccgagatcgcg
gtcctgttccggaccaactcccagtcggagacctatgagcaggcactcgccgacgccggg
gtcccgtaccagttgcggggcgcggagcgcttcttcgaccggcccgaggtgcgcaaggcc
ggcagtgccctgcgggccgccgcccgcttcggcggcaacgactccctcctcgacgacgcc
gtcgacctgccctcgcaagtgcgcgcggtgctgtccggggagggctggacgacccagccc
ccggccgggtcgggcgccgtccgggagcggtgggagtcgctggccgccctggtgggactg
gcccaggacttcgccgccgccagagcgggagccacgctgagcgacctcgtcgtggaactc
gacgagcgcgcgggcgcccagcacgccccgacggtgcagggcgtcaccctcgcctccctg
cactcggccaagggcctggagtgggacgtcgtgttcctggtcggcgtcgccgagggcatg
atgccgatcacctacgcaaagaccgacgagcagatcgaggaggaacgtcgccttctctac
gtcggtgtcacccgcgcgcgtgaacgcctgcacctgtcctgggcactggcccggtcgccc
gggggccggccgaaccgcaggcccagccgctttctgaaggggctgcggcccggttcgggc
acggcgggcggacaggcggccgccgcgggtgccgggggcgtggagcgcgggatccgaggg
ggcggcggtggtggcgcggccgccgcgccgagacggacccagcggacgcccgcccgctgc
cgggtctgcggacgcacgctcaccgacgccggtgagatgaagctgatgcgctgcgagggg
tgcccgtcagacatggacgagggcgtctacgagcggttgcgggagtggcgggcggtgcag
gcggggcgcagcggacagcccgcgttctgcgtcttcaccgacaagacgctgatggcgatc
gccgagtccgtcccggaggacgagcgggagctggccaggatcccgggggtcgggatgcgc
aagctcaatcgctacgggaccgacgtcctggccatctgcgcaggccaggaaggcgtgggg
cttgacgaggacgactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-Gene (1)   
   KITASATO (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (40)   

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