KEGG   Ruegeria pomeroyi: SPOA0047
Entry
SPOA0047          CDS       T00215                                 
Symbol
pcaQ
Name
(GenBank) pca operon transcriptional activator PcaQ
  KO
K02623  LysR family transcriptional regulator, pca operon transcriptional activator
Organism
sil  Ruegeria pomeroyi
Brite
KEGG Orthology (KO) [BR:sil00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sil03000]
    SPOA0047 (pcaQ)
Transcription factors [BR:sil03000]
 Prokaryotic type
  Helix-turn-helix
   LysR family
    SPOA0047 (pcaQ)
SSDB
Motif
Pfam: LysR_substrate HTH_1 SBP_bac_3 HTH_30
Other DBs
NCBI-ProteinID: AAV97187
RoseoBase_p: pcaQ
UniProt: F7IU51
Position
megaplasmid:41523..42440
AA seq 305 aa
MIDRRIKFRHIQCFVEIAREGSLKTAAAKLFLTQPAMSKTLKELEEITGTTLMRRSRAGV
ELTKPGEVFLHFARMSLASLQQGLDGIETEGRRQRETLSVGALPSVAAYLMPGAVSEFSR
LAPHALLRIQDGPHGYLIERLRLGALDLVIGRMGPPETMQGLSFTQLYQEQVVFVVRPGH
PLLAAPDLARVADWPVIYPPPGAAIRPLVEQMLIANGIGEFPNRLETVSGAFGRVHARRS
DAVWIISRGVVANEIAEGRLVALPFGTELTRGPVGLMTRPDRPESAVAQLFALALRNVIG
AGAGA
NT seq 918 nt   +upstreamnt  +downstreamnt
atgatcgaccgccgcatcaagttccgccacatccagtgttttgtggaaatcgcgcgcgag
ggcagtctgaaaactgcggcggcaaagctgttcctgacccagcccgccatgtccaagacc
ctgaaggagttggaagagatcaccggcaccaccctgatgcgccgcagccgggcgggggtt
gagctgaccaagccaggcgaggtgttcctgcatttcgcccggatgtcgttggccagcctg
caacaggggctcgacgggatcgagaccgaggggcgccgccagcgggaaaccctgtcggta
ggcgcgctgcccagtgtggcggcctatctgatgcccggtgccgtgagtgaattctcgcgg
ttggcgccacatgcgttgttgcgaattcaggacgggccgcacggatatctgatcgagcgg
ctcaggctgggggcgctggacctggtgatcgggcggatgggtccgccggaaaccatgcag
ggcctgtcctttacccagctctatcaggaacaggtggtctttgtggtacgcccgggccat
ccgttgctggccgcgcccgatctggcgcgggtggccgactggccggtgatctatcccccg
cccggcgccgcgatccggcccctggtcgagcagatgctgatcgccaacgggatcggcgag
tttcccaaccggctggaaaccgtctcgggcgcctttggccgggtgcatgcccgccgctcg
gacgcggtctggatcatctcgcgcggggttgtggccaatgagatcgcagaggggcggctt
gtcgcgctgccctttggtaccgagctgacccggggaccggttgggctgatgacccggcca
gaccggcccgagagcgcggtggcccagctctttgcgctggcattgcgcaatgtgatcggc
gccggggcaggggcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
   ROSEOBASE_P (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system