KEGG   Sinorhizobium meliloti 1021: SMc03173
Entry
SMc03173          CDS       T00058                                 
Symbol
lysS
Name
(GenBank) Lysyl-tRNA synthetase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
sme  Sinorhizobium meliloti 1021
Pathway
sme00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:sme00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    SMc03173 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:sme01007]
    SMc03173 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sme03016]
    SMc03173 (lysS)
Enzymes [BR:sme01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     SMc03173 (lysS)
Amino acid related enzymes [BR:sme01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   SMc03173 (lysS)
Transfer RNA biogenesis [BR:sme03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    SMc03173 (lysS)
 Prokaryotic type
   Other AARSs
    SMc03173 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: CAC47483
RhizoBase: SMc03173
UniProt: O87821
Position
3134551..3136047
AA seq 498 aa
MTDKTQAAGLSSDATEVRSQKLDLLRQQIGDVYPAHFHRTLTNAELAEKYAGLEPDTESG
ETVTVAGRVFSSRNSGMFMDLHDASGKIQIFSHKDTAPEEARALLPMIDLGDIIGVTGEV
RRTKRGELTVNAKEITMLCKSLLPMPEKYHGLADIETRYRKRYLDIMVNEESKLRFQQRS
RIVSSLRRFLEDEGFMEVETPMLQPIYGGATAEPFKTHHNTLKLDMYLRIAPELYLKRIL
VSGLTDKVFEINRNFRNEGVSTRHNPEFTMMECYWAYADYEDVMGLVERMFETLALAVHG
KTEFEFGDKQLSFKGPFPRVSMPAAVKDATGIDFLALKSDEEARQAARDAGVEIEKDATW
GEVLAFLFEEKVEATLIQPAHVIHFPKDISPFAKEVPGEPRLVERFETYCNGWEIGNAFS
ELNDPVEQRARMVEQMEQAHARGEKEKTLDEDFLDAMDQGMPPAGGLGIGVDRLIMLLTN
SPSIRDIILFPARRQKAD
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgaccgacaagacacaggcagccggcctctcctccgacgcgacggaagtgcgctcccag
aagctcgacctgctgcgccagcagatcggcgacgtctatcccgcgcatttccaccgtacg
ctcaccaatgcggaactcgcggagaaatatgccgggctggagcccgataccgaaagcggc
gaaacggtaaccgttgccggccgcgttttctcctcgcgcaattccggcatgttcatggat
cttcatgacgcctccggcaagatccagatcttttcgcacaaggatacggcaccggaagag
gcgcgcgcgcttctgccgatgatcgatctcggcgacatcatcggggtcaccggagaggtg
cgccgcaccaagcgcggcgaactgaccgtcaacgccaaagagatcaccatgctctgcaag
tcgctcctgccgatgccggagaagtatcacgggcttgccgatatcgagacgcgctaccgc
aagcgctacctcgacatcatggtcaacgaggaatcgaagctgcgcttccagcagcgaagc
cgcatcgtgtcgagcctgcgccgattcctcgaggacgaaggcttcatggaagtggagacg
ccgatgctgcagccgatctacggcggcgcgacggccgagcccttcaagacgcatcacaac
acgctgaagctcgacatgtatctgcgcatcgcgcccgagctttacctgaagcgcattctc
gtttccggcctgacggacaaggtcttcgagatcaaccgcaacttccgcaacgaaggcgtc
tcgacccggcacaatcctgaattcaccatgatggagtgctactgggcctatgctgactac
gaggacgtgatgggtctcgtggagcgcatgttcgagaccctggcgcttgcggttcacggc
aagacggaattcgagttcggcgacaagcagctctccttcaaggggccgttcccgcgcgtc
tctatgccggcggccgtcaaggacgcgaccggaatcgatttccttgccctcaagagcgac
gaggaggcccggcaggcggctcgcgacgccggtgtcgagatcgagaaggacgcgacctgg
ggcgaagtgctcgccttcctcttcgaggagaaggtcgaagcgaccttgatccagcctgct
catgtcatccacttcccgaaggacatctcgcccttcgccaaggaggtgccgggcgagccg
cggctcgtcgagcgcttcgagacctattgcaacggctgggagatcggcaacgccttttcc
gagctcaacgacccggtcgagcagcgcgcccgcatggtcgagcagatggaacaggcgcat
gcccgcggcgagaaggaaaagacgctggacgaggacttcctcgatgccatggaccagggc
atgccgcccgccggggggttggggatcggtgtcgaccggctgatcatgctgctcaccaac
tcgccgtcgatccgcgacatcatcctcttcccggcccgccgccagaaggccgattga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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