KEGG   Schizosaccharomyces pombe (fission yeast): SPBC354.02c
Entry
SPBC354.02c       CDS       T00076                                 
Symbol
sec61
Name
(RefSeq) translocon alpha subunit Sec61
  KO
K10956  protein transport protein SEC61 subunit alpha
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03060  Protein export
spo04141  Protein processing in endoplasmic reticulum
spo04145  Phagosome
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    SPBC354.02c (sec61)
   04141 Protein processing in endoplasmic reticulum
    SPBC354.02c (sec61)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    SPBC354.02c (sec61)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spo04131]
    SPBC354.02c (sec61)
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spo02044]
    SPBC354.02c (sec61)
Membrane trafficking [BR:spo04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   SEC61 complex
    SPBC354.02c (sec61)
Secretion system [BR:spo02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   SPBC354.02c (sec61)
SSDB
Motif
Pfam: SecY Plug_translocon
Other DBs
NCBI-GeneID: 2541037
NCBI-ProteinID: NP_595226
PomBase: SPBC354.02c
Ensembl: SPBC354.02c
UniProt: P79088
Position
II:complement(544751..547039)
AA seq 479 aa
MSDLRFLDLVKPFAPFLPEIAAPERKVPFKQKMLWTGVTLLIFLVMSQVPLYGIVSSDSS
DPLLWLRMILAANRGTLMELGISPIVTSSMLVQLLVGSQLIEVNMELKSDREMYQLVQKF
LAIIIAFGQATAYVLTGMYGRPQDLGAGICLLLILQLAAASLIVLLLDELLQKGYGLGSG
ISLFIATINCENIFWKAFSPTTYHIANGVQFEGAVINFVYVMFTWDNKAAALYQAFFRSG
LTSSQIQLPNLWNFFATLLVFGVVIYLQDFRVEIPIRSQKFRGYRSTFPVKLLYTSNTPI
MLQSALTSNLFFASRLLFNRFSSNFLVRFLGVWEQTATSGLSYYLSPPASFQDALIDPIH
TLVYVFFTMFACALFSKLWIEVSGASPRDVAKQLKSQQLVMAGHREGSMYKELKRIIPTA
AWLSGAVVGALAVASDLLGALGSGTAVLLCTTTIYGYYEQLQKEIKGDQYGLPVTPMMQ
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgagtgatttacgatttctggaccttgtaaagcctttcgcgccattcttaccggagatt
gctgcacccgaacgaaaggtccctttcaagcaaaaaatgttatggactggagtcaccttg
ttgatttttttggttatgtctcaagtaccattatatggaattgtctcttcagactcttcg
gatcctttgctctggctacgtatgattttagctgccaatcgaggaacactcatggaatta
ggtatatctcctattgtcacttccagtatgctggttcagcttcttgtcggttcacaattg
attgaagttaacatggagctaaaatccgatcgagaaatgtaccaacttgttcaaaaattc
ttggctatcatcattgcgtttggtcaagctacagcttatgtgttgacaggcatgtacgga
cgtcctcaagatttaggtgcaggtatttgtttgcttcttatccttcaattggctgccgct
agtctgattgttttacttttggatgaactattgcagaagggttatggtttaggatccggt
atttctctttttattgctacaatcaattgcgaaaacatcttttggaaagccttttccccc
accacctatcatattgccaatggtgttcaatttgaaggtgccgttatcaattttgtttat
gttatgtttacatgggataacaaagcagctgccctttatcaagctttcttccgttcagga
cttacttccagtcaaattcagcttcccaacctctggaacttctttgctactttactcgtt
ttcggagtcgttatttaccttcaagatttccgcgtcgagattccaattcgttctcaaaag
ttccgtggttatagaagtaccttccctgtcaaattgctgtacacgtctaatacccctatt
atgcttcaatctgcgttgacttctaatctcttcttcgccagccgtcttttattcaaccgt
ttttccagtaatttcttagtacgctttttaggtgtttgggaacaaaccgctacttctggt
ttatcgtattatctctctcctcctgcgtccttccaagatgctctcattgaccctattcat
actttggtctacgtattttttaccatgtttgcgtgcgctcttttctctaaactttggatt
gaagtttctggagcaagcccaagagacgttgccaagcaacttaagagtcagcagcttgtt
atggccggtcatcgtgagggtagcatgtacaaggaattaaagcgtatcatccctactgcc
gcttggctttctggtgccgttgttggtgcattggccgttgcttccgatttgcttggtgcc
ttaggatcaggtactgctgttttattgtgtacgaccaccatttatggctattatgaacag
ttacagaaagaaattaaaggtgatcaatacggtttacccgttactcccatgatgcaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

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