KEGG   Schizosaccharomyces pombe (fission yeast): SPAC10F6.09c
Entry
SPAC10F6.09c      CDS       T00076                                 
Symbol
psm3
Name
(RefSeq) mitotic cohesin complex subunit Psm3
  KO
K06669  structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo04111  Cell cycle - yeast
spo04113  Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:spo00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    SPAC10F6.09c (psm3)
   04113 Meiosis - yeast
    SPAC10F6.09c (psm3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:spo03036]
    SPAC10F6.09c (psm3)
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:spo00535]
    SPAC10F6.09c (psm3)
Chromosome and associated proteins [BR:spo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    SPAC10F6.09c (psm3)
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    SPAC10F6.09c (psm3)
Proteoglycans [BR:spo00535]
 Extracellular matrix (ECM) proteoglycans
  Basement membrane proteoglycans
   SPAC10F6.09c (psm3)
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_23 AAA_21 AAA_15 AAA_29 FtsK_SpoIIIE ABC_tran
Other DBs
NCBI-GeneID: 2543010
NCBI-ProteinID: NP_593260
PomBase: SPAC10F6.09c
Ensembl: SPAC10F6.09c
UniProt: O42649
Structure
Position
I:complement(1220969..1224862)
AA seq 1194 aa
MYITKIVIQGFKSYKDYTVIEPLSPHHNVIVGRNGSGKSNFFAAIRFVLSDAYTHLSREE
RQALLHEGPGATVMSAYVEVTFANADNRFPTGKSEVVLRRTIGLKKDEYSLDKKTVSKTE
VINLLESAGFSRSNPYYIVPQGRVTSLTNAKDSERLELLKEVAGTQIYENRRAESNKIMD
ETIQKSEKIDELLQYIEERLRELEEEKNDLAVYHKKDNERRCLEYAIYSREHDEINSVLD
ALEQDRIAALERNDDDSGAFIQREERIERIKAEITELNHSLELLRVEKQQNDEDYTNIMK
SKVALELQSSQLSRQIEFSKKDESSKLNILSELESKISEKENELSEILPKYNAIVSEADD
LNKRIMLLKNQKQSLLDKQSRTSQFTTKKERDEWIRNQLLQINRNINSTKENSDYLKTEY
DEMENELKAKLSRKKEIEISLESQGDRMSQLLANITSINERKENLTDKRKSLWREEAKLK
SSIENVKDDLSRSEKALGTTMDRNTSNGIRAVKDIAERLKLEGYYGPLCELFKVDNRFKV
AVEATAGNSLFHIVVDNDETATQILDVIYKENAGRVTFMPLNKLRPKAVTYPDASDALPL
IQYLEFDPKFDAAIKQVFSKTIVCPSIETASQYARSHQLNGITLSGDRSDKKGALTAGYR
DYRNSRLDAIKNVKTYQIKFSDLQESLEKCRSEIESFDQKITACLDDLQKAQLSLKQFER
DHIPLKDELVTITGETTDLQESMHHKSRMLELVVLELHTLEQQANDLKSELSSEMDELDP
KDVEALKSLSGQIENLSHEFDAIIKERAHIEARKTALEYELNTNLYLRRNPLKAEIGSDN
RIDESELNSVKRSLLKYENKLQIIKSSSSGLEEQMQRINSEISDKRNELESLEELQHEVA
TRIEQDAKINERNAAKRSLLLARKKECNEKIKSLGVLPEEAFIKYVSTSSNAIVKKLHKI
NEALKDYGSVNKKAYEQFNNFTKQRDSLLARREELRRSQESISELTTVLDQRKDEAIERT
FKQVAKSFSEIFVKLVPAGRGELVMNRRSELSQSIEQDISMDIDTPSQKSSIDNYTGISI
RVSFNSKDDEQLNINQLSGGQKSLCALTLIFAIQRCDPAPFNILDECDANLDAQYRSAIA
AMVKEMSKTSQFICTTFRPEMVKVADNFYGVMFNHKVSTVESISKEEAMAFVEG
NT seq 3585 nt   +upstreamnt  +downstreamnt
atgtatatcacaaaaattgttattcaagggtttaaatcttataaagattatactgtaata
gagcctttaagccctcaccacaatgtaattgtgggacgaaatggatctggtaaaagcaat
ttttttgctgcaattcgattcgtattaagtgatgcgtatacacatttaagccgtgaagaa
agacaagctttgctgcatgaaggccctggtgcaactgtcatgagcgcatacgttgaagtt
acgttcgctaatgctgataatcgatttcccaccggtaaaagcgaagttgtcttgcgtcgt
acaattggattgaaaaaagacgaatactctttggataagaaaactgtaagcaagacagag
gttattaatcttctcgagtctgctgggttttcaagatccaatccttactacattgttcct
caaggaagggtcacatccctaaccaatgcaaaggattcagagcgtttagaacttttaaaa
gaggttgcaggtactcaaatttatgagaacagaagagctgaatccaataaaattatggac
gagacaattcaaaaatcggagaaaattgatgaacttttgcaatacattgaagaacggttg
cgtgagttagaagaggagaaaaacgatcttgcagtttatcacaaaaaagacaacgaaaga
agatgcttggaatatgctatttattctcgcgagcatgatgagattaactccgtattggat
gccttagaacaagaccggatagctgcacttgagcgtaatgatgatgattcgggtgctttc
attcaaagagaggaacgcattgaacgaattaaggctgaaattacagagctcaaccactcg
cttgagcttttacgtgttgaaaaacagcaaaacgatgaggattataccaatattatgaaa
agtaaagtcgcattggaattacagtcttctcaattatcacgtcaaattgaattttcgaag
aaagatgagagctcaaagctcaacatactttctgaattagagtcaaaaatctctgagaaa
gaaaatgagctttcagaaattcttccaaagtataacgctatagtatctgaagctgatgat
cttaataaaagaatcatgctgctcaaaaatcagaagcaatcacttttggacaagcaatcg
aggacttctcaattcactaccaaaaaagaacgtgatgaatggatcagaaatcagctctta
cagatcaaccgtaacattaattctacaaaggagaacagtgattacttgaagactgagtat
gacgaaatggaaaatgaactcaaagcaaaattatctcgtaaaaaggaaattgaaatttcc
cttgaatctcaaggtgatcgaatgtcgcaactacttgctaacattacttcaattaatgaa
aggaaagaaaatttgacggacaaaaggaaatctctgtggagagaagaagccaaacttaag
tcgtctatcgaaaatgttaaggacgatctttctcgttctgagaaggctttggggactaca
atggatcggaatacaagtaatggtattagagctgtcaaagacattgctgaacgtctgaaa
ctcgaaggttactatggtccactttgtgagcttttcaaggttgataaccgtttcaaggtc
gctgttgaggctactgctgggaacagtctatttcatatcgtggtagataacgatgaaacc
gcaactcaaattcttgacgttatatataaagaaaatgccggtagagttacgttcatgcct
ttgaacaagcttcgtccaaaggcggttacttatcctgatgccagtgatgctttaccttta
attcaatatttagagttcgatcccaagtttgatgctgcgattaaacaagttttttcgaaa
accattgtttgtccatcgattgagaccgcctcccagtatgctcgatctcatcaattaaac
ggtattactttaagtggtgatcgatctgacaaaaaaggtgcattaactgccgggtatcgt
gattatagaaattccaggctggatgctatcaaaaacgttaaaacataccagatcaaattc
tcggatttacaagaaagtttggagaaatgtcgttccgaaattgaatcttttgaccaaaaa
attactgcatgcttagatgatttgcaaaaggctcaactaagtttaaagcaatttgaaaga
gatcatattcctcttaaagatgaactcgtaactattactggagaaacaacagatcttcaa
gaatcaatgcatcataaaagtcgtatgcttgagcttgttgttttggaactacatacactt
gaacaacaagctaatgacttgaaatctgaattaagttcagaaatggatgaacttgatccc
aaagatgtggaagcactaaagtctttgagtggtcaaattgaaaatctctctcatgagttt
gatgccatcattaaagaacgagcacatatagaagcaagaaagacggctcttgaatatgaa
ttaaatacaaacttatatttaagaaggaatccattgaaagctgaaattggttctgataac
agaatagacgaatcagaattgaacagcgtaaagagatctctacttaagtatgaaaacaaa
ttgcaaattattaaatcttcatcttctgggttggaggaacaaatgcaaagaatcaattct
gaaataagcgataaacgaaatgaattggaatcgctagaagaattgcagcacgaagtggct
acccgaattgaacaagatgcaaaaattaacgaaagaaacgcagcaaagagaagtttgctt
ctcgcacggaaaaaagaatgtaacgagaaaattaaatcattgggggttttgccggaagaa
gcatttattaaatatgtttcaactagctcaaatgctattgtgaagaaacttcataaaatc
aacgaagcccttaaagattatggaagcgttaataagaaagcatatgagcaatttaataat
tttactaaacaacgcgattcattgttggctaggagagaagagttgcgtcgttctcaggag
tcaattagtgagcttacgacagtacttgaccaaagaaaagatgaagcaattgagcgtacc
tttaaacaagttgctaaaagcttttctgaaatattcgttaaacttgttccggcaggtaga
ggtgaattggttatgaatagaagaagtgaattgagtcaaagcatcgaacaagacatctcc
atggacattgatacgccatcccagaaaagctcgatcgacaattatacaggtatcagcata
agagtttcttttaacagtaaggatgatgaacaactgaatattaatcaattgagtggcggt
cagaagtcactttgtgctttaactttaatttttgctatccaacgctgtgatcctgcgcct
tttaatatactcgatgaatgtgatgctaatttagatgcacaatatcgctcggccattgca
gcgatggtcaaagagatgtcaaaaactagtcaatttatttgcactacttttcggcctgag
atggtgaaagttgcggacaatttttacggagtaatgtttaatcacaaagtttcaacagtt
gagtcgatttctaaggaggaggctatggcattcgttgaaggataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (48)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (1)   
   PDB (1)   
Protein domain (8)   
   Pfam (8)   
All databases (67)   

Download RDF
DBGET integrated database retrieval system