KEGG   Schizosaccharomyces pombe (fission yeast): SPBC19C7.07c
Entry
SPBC19C7.07c      CDS       T00076                                 
Symbol
sen34
Name
(RefSeq) putative tRNA-splicing endonuclease catalytic subunit Sen34
  KO
K15323  tRNA-splicing endonuclease subunit Sen34 [EC:4.6.1.16]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:spo03016]
    SPBC19C7.07c (sen34)
Enzymes [BR:spo01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     SPBC19C7.07c (sen34)
Transfer RNA biogenesis [BR:spo03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    SPBC19C7.07c (sen34)
SSDB
Motif
Pfam: tRNA_int_endo PB2_627-dom CNOT1_CAF1_bind tRNA_int_endo_N DUF6657
Other DBs
NCBI-GeneID: 2540591
NCBI-ProteinID: NP_596163
PomBase: SPBC19C7.07c
Ensembl: SPBC19C7.07c
UniProt: O60156
Position
II:complement(2833988..2835231)
AA seq 284 aa
MEDEKFPISYVHGKFLVFDVQAVEVFRKNYHILGTLVGTLPQLPQQNVFLGLPMELSKEE
AFYLIEKGISYIVDDTKVHKQLLENTTKDDVKQCLKKRQSLAYDQMIAAKKKENEKKIEI
MKKLGRTLPLDPLNYDEHDSFDLSWIPVDTVTTRIAEKSSMNDDFHKEEDVFENLDINRY
LMFKSLVDTGFYLNPGLRFGCQFVAYPGDALRYHSHYLVNSYKWDQEIPVLFLIGGGRLG
TAVKKTWLIGGSNDRNINMNGEKSKEELLLLPVRHFSIEWAGFG
NT seq 855 nt   +upstreamnt  +downstreamnt
atggaagatgagaagttcccaatatcttacgttcatgggaagttccttgtttttgacgtt
caagcagtagaagtatttcgtaaaaattatcatattcttggtacgctagttggaactctg
ccacagttgccgcaacaaaatgtatttctaggccttcccatggaattatctaaagaagaa
gctttttacttaattgaaaaaggaatttcttatatagttgatgatacgaaggtgcataag
caactccttgaaaatacgactaaagacgatgtgaaacagtgtttaaaaaaacgccagtca
ttggcatatgatcaaatgattgcggcaaaaaagaaagaaaacgaaaagaaaattgaaata
atgaaaaaattgggtcggactctaccacttgatcctttgaattatgatgaacacgattca
tttgatttatcctggataccagtggacactgttactaccagaattgctgagaagtcatca
atgaatgacgactttcacaaagaggaagatgttttcgaaaatttagatataaatagatac
ctgatgtttaagtccttggttgatacaggtttctacttgaatcctggtttgcgttttgga
tgtcaattcgtagcttaccctggtgatgcattaaggtatcattctcactatctagttaat
tcttataaatgggaccaggagataccagtccttttcttgattggtggtggacgtcttgga
acagcagtaaaaaaaacatggttgatcggaggcagtaatgatcgaaacatcaatatgaat
ggggaaaagtctaaggaagaactattactattaccagttcgtcatttttccattgaatgg
gctgggtttggctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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