KEGG   Schizosaccharomyces pombe (fission yeast): SPBC543.06c
Entry
SPBC543.06c       CDS       T00076                                 
Symbol
dbp8
Name
(RefSeq) putative ATP-dependent RNA helicase Dbp8
  KO
K14778  ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:spo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spo03009]
    SPBC543.06c (dbp8)
Enzymes [BR:spo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SPBC543.06c (dbp8)
Ribosome biogenesis [BR:spo03009]
 Eukaryotic type
  90S particles
   Helicases
    SPBC543.06c (dbp8)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 DUF4351 DUF6106
Other DBs
NCBI-GeneID: 2541069
NCBI-ProteinID: NP_596794
PomBase: SPBC543.06c
Ensembl: SPBC543.06c
UniProt: Q9HGM5
Position
II:complement(4310179..4311822)
AA seq 453 aa
MSEHTRKSFSDLGISPWLIDTLKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAA
FALPIIEKWSKDPSGIFALILTPTRELAIQIDEQFAALGANLNLKHALIVGGMDMIRQSI
DLSKRPHVVVATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDLDDCFSV
LPASEDRQTLLFTATVTDAIRQLKYQPQKNNKPPLWLYEVETDNISVPSTLQQSYIFVSS
QVREAYLVHLLTIPENAKKSAIIFVNRTRTAELIYSILRLLELRVTELHSEMVQRERINS
LGRFRAEAAKILVATDVASRGLDIPSVQLVINFDLPRDPDDYIHRVGRTARAGRSGESIS
IVTERDVDLVHAIEDRVGTKLSEYEHVSENKMLEYIKEVTDAKRQASLEMIDRGFGERRQ
KRNEKRLMANGISNKLKNSGRKKKAKNTLSTEK
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgtcagaacatacaagaaaatcattctctgatttaggaatatcgccatggcttatcgat
acgctaaaagcacttgcaatatatgaacctacagatattcaggaaggagtaattgctcag
attttagaaggacgtaattgtattggaggtgctaaaacaggttctggtaaaactgctgct
tttgctttgcctattattgaaaaatggtctaaggatccatcaggaatatttgctcttatt
ttgacaccaaccagagaacttgcaatacagattgatgaacaatttgctgctttaggtgct
aatcttaatttaaagcatgcgctcatcgttggaggcatggatatgatacgacaatctatt
gatttatcgaaacggccccatgttgttgtagctactcctggtcgcctagctgacttgatt
agaagtaatggtgaagaaacgatagccggactacgtcgaataaaatttttggtaatggac
gaagccgaccgtttgttgtctcctacctttgctgatgacttggatgattgcttttctgtt
cttccagcctctgaagatcgtcaaacgcttttgtttactgcaactgttactgatgctatt
cgtcagctcaaatatcagccacagaaaaataataagcctcccctttggttatacgaagtt
gaaactgataacatttccgtaccttctactttgcagcaaagttacatatttgtttcctca
caagtacgagaagcttatttggtgcatttgttaacgattcctgagaacgctaaaaagtct
gcaattatctttgtaaatcggactcgcactgctgaattgatatattctattcttcgattg
ctcgagcttcgtgtcaccgaacttcattcagaaatggtacaacgtgaaaggatcaattca
cttggacggtttcgtgcggaagctgcaaaaattttggtagccactgacgttgcaagcaga
ggtttggatattccttctgtgcaactagtaattaacttcgaccttcctcgtgacccagac
gactatattcaccgagtaggtcgtacagctcgtgctggacgcagtggcgagtccatttcc
attgtaacggagagagatgttgatttagtccatgctattgaggatcgagtaggaactaag
ctttctgaatatgaacacgtgtcagagaataagatgcttgaatacatcaaggaagttacg
gacgctaaacgccaggcttctcttgagatgatcgataggggatttggtgaaaggagacag
aagcgaaacgagaaaaggctgatggccaatggtatttctaataaattaaaaaattctgga
cgcaaaaagaaagcgaagaatactttatctacggaaaagtag

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (37)   

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