KEGG   Schizosaccharomyces pombe (fission yeast): SPCC550.11
Entry
SPCC550.11        CDS       T00076                                 
Name
(RefSeq) putative karyopherin
  KO
K20223  importin-7
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    SPCC550.11
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spo03009]
    SPCC550.11
Ribosome biogenesis [BR:spo03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    SPCC550.11
  Pre-60S particles
    SPCC550.11
SSDB
Motif
Pfam: IBN_N Cse1 HEAT DUF3730 Xpo1 DUF4704 Fe-ADH DUF2150 MOR2-PAG1_C
Other DBs
NCBI-GeneID: 2539463
NCBI-ProteinID: NP_588103
PomBase: SPCC550.11
Ensembl: SPCC550.11
UniProt: O59809
Position
III:1207623..1211442
AA seq 1029 aa
MSLVEHFDATLSADPNTRTKAELSLKQLEKEPSFVLAVLQLLSSQEISLPTQQAAVIYLK
NRVSRSWSSIDDAPSPLDIPEEQKALFRQNILPVLLQSPMSTRSHLMAILNIILSTDFPE
YWPGFSEYTSNLVHSTERCEVYAGLICFHELAKVYRWRLDDRQRDIGPLVAALFPTILQL
GQGLINLEDNDSAEMLRLILKTFKSVIALELPPELLANDMILSWIQLLLAVVQKPLPESL
MSLEPEVRQSHVWHKCKKWAYYSLNRIFTRYGEPSSLVGDSANKYRAFAKNFITNVVPNI
LETYIQQTILWTQGQLWLSPRVLYFLGCFYEECVKPKSTWALLKPHLQLLIGSFVFPQLC
MSEEDEELWELDPVEFIHKYIDIYDDFNSADVAASRFLVKLASKRKKYTFMGILSFASDI
LNQYAASPPNEKNPRQKEGALRMVAAVSNSILSKNSPVAGMMQDFLVAHVMPEFTSPVGY
LRSRACEMINRFSEIDWSDKSQLLNAYQAVLNCLQDNDLPVRIQAALALQPLMRHLEVHD
VMTAHVPIIMQNLLFLANEVDIDALSSCMEEFVSSFSHELTPFASQLAKQLRNTFVKLMQ
ETMDESTTVDDFDSLVDDKSIAAIGILNTLSTMILSLENTVDVLREIEAILLPMINFVLD
NNIFDVYAELFEIIDGCTFASKEISPIMWGVYEKLQKVLKESGIEFVEEATPALSNFITY
GGKEFASRPDYIAVMVDIIMQVFNSEHLAVNDRVSACKLTELLMLNYRGLLDQYVPAFIE
VAGNLLLVTEKPTSQTYRVFLLEVIINALYYNPSMSLGVLEMHQWTLPFFALWFENIPSF
TRVHDKKLSLVAILSVISLGAQQVAVAIQDSWGNIMKVMITLLNTLPEALAARAELEKEY
DGETFNLSGSGWNDGIDWEADDDEGVDDFAVEYGGPDLGGEISADVVDDFDEFEHFQGNY
LLDEDPLFHTLLDQVDPFSLFQEFMVHLKDNSPVTLQDLVKNLEASEQQSLQRLVTEKPS
TLAVASDKT
NT seq 3090 nt   +upstreamnt  +downstreamnt
atgtctttggttgagcatttcgatgcgactttgagcgctgatcccaacactcgcactaag
gccgaactttcactaaaacagttagaaaaagagcccagttttgttttggcggttttacaa
cttttaagtagtcaagaaatttctttgcctactcaacaggcagccgttatttatttaaaa
aatcgggtatctcgttcttggtctagtatcgatgatgctccatcacctttggatattccg
gaagagcaaaaagctttgttcaggcaaaacattcttccggtgctcttgcaaagcccaatg
tcgacaaggtctcatttgatggcgatccttaatatcatcttgtcaaccgatttccccgaa
tattggcccggattcagcgaatacacttctaacctcgttcactcaaccgaacgttgtgag
gtgtatgctggtcttatttgttttcatgagttggctaaagtataccgctggcgtttggat
gaccgtcaacgtgacattggtccgttagtcgcagcacttttccccactattcttcaactt
ggtcagggtcttatcaatcttgaagacaatgattcagccgaaatgcttcgtcttatttta
aagacatttaaatctgtcattgcccttgagcttcctccggagttacttgctaacgatatg
attctttcctggatccagcttttattagcagtggtgcaaaaacctctccccgaatctttg
atgtcgcttgaaccagaggtccgtcaatctcatgtttggcataaatgtaaaaaatgggcg
tattattctttgaatagaatattcactagatatggagagcctagctctttggtgggtgat
tctgcaaacaaataccgtgcttttgcaaagaacttcattacaaatgttgttcccaacatt
ctggagacatacattcaacaaactattctttggactcaaggtcagctctggttatctccc
cgtgttttgtattttttgggatgcttctatgaagagtgtgtgaagccaaagtccacttgg
gcactcctcaagcctcatcttcaactattgattggcagctttgtgtttcctcaattatgt
atgagcgaagaagatgaagaactttgggaacttgatccagtagagtttattcacaaatat
attgatatctatgatgatttcaattctgctgatgttgctgcttcacggttccttgtgaaa
ttagcatcgaaacgcaagaaatatacgttcatgggtattctttccttcgccagtgacatc
ctgaaccaatacgccgcttcacctcctaatgaaaaaaatcctcgccagaaagaaggtgca
cttcgtatggttgctgctgtatctaattccatcctttctaagaactcccctgttgcaggc
atgatgcaagatttccttgtcgctcacgttatgcccgaatttactagcccagttggttat
ttacgatctcgagcttgtgaaatgatcaatcggttttcagaaattgattggagtgataaa
tcgcagcttttgaatgcataccaggcagttttgaattgtcttcaagataacgatttacct
gtgagaattcaagctgctttagctttgcaaccacttatgcgtcatctggaggtacacgat
gttatgaccgcccatgtacccatcattatgcaaaatctcctatttctggcgaatgaagtt
gatattgatgctttatcttcttgtatggaggaatttgtaagttcttttagtcacgagtta
acaccttttgcttcacaattggctaaacaacttcgcaataccttcgtcaagcttatgcaa
gaaaccatggacgaatctactaccgtagatgattttgactccttagttgatgataaatcg
attgcggctattggcattttaaatactctcagtacaatgattttaagtctcgagaacacg
gttgatgtcttacgtgaaattgaagcaatcttacttccaatgattaattttgtattagat
aacaacatttttgacgtgtatgcagagttgtttgaaattatcgatggttgcacttttgct
tctaaggagatatcccctattatgtggggcgtgtatgaaaagcttcaaaaggtgttgaaa
gagtctggcattgagtttgtagaggaggcaactcctgccttaagtaactttatcacgtat
ggtggaaaggaatttgcttcccgtcctgattatatcgccgttatggttgatattatcatg
caagtttttaatagcgagcacctggccgtcaatgaccgtgtttcggcttgtaaactaacc
gaacttttaatgcttaattatcgtggccttttggatcaatatgtgcctgcgtttattgag
gttgctggtaatctcttacttgtaactgaaaagccaacttctcaaacataccgcgtattt
ttgttggaggttataatcaatgcattatattataacccatcgatgtctcttggggtactt
gaaatgcatcagtggactttaccattctttgcgttatggtttgaaaatataccttcgttt
actcgtgtgcatgataaaaagttgagtttggtagctattttatcggtaatttcactggga
gctcaacaagttgctgttgctatccaagactcttggggtaatataatgaaagtcatgata
actcttttaaatacactacctgaagcattagctgctcgcgcggaattagaaaaagagtat
gacggtgaaacatttaatttatctggctctggttggaatgatggcatcgattgggaagcc
gatgatgatgagggtgtcgatgactttgccgtcgaatatgggggacctgatttgggtgga
gaaatctcggctgatgtggttgacgattttgacgaatttgagcatttccaaggaaattac
ttgttggacgaggatcctcttttccatactttgttagatcaagttgatccattttcactt
ttccaagagtttatggttcatttaaaggacaacagccctgtcacattacaagatcttgtc
aaaaatttggaagcatccgagcagcaatccttacagagattggtaactgaaaaaccctct
acccttgctgtcgcttccgataaaacatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
   POMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (47)   

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