KEGG   Sus scrofa (pig): 100037976
Entry
100037976         CDS       T01009                                 
Symbol
TNFSF11
Name
(RefSeq) tumor necrosis factor ligand superfamily member 11
  KO
K05473  tumor necrosis factor ligand superfamily member 11
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04060  Cytokine-cytokine receptor interaction
ssc04064  NF-kappa B signaling pathway
ssc04380  Osteoclast differentiation
ssc04917  Prolactin signaling pathway
ssc04928  Parathyroid hormone synthesis, secretion and action
ssc05207  Chemical carcinogenesis - receptor activation
ssc05224  Breast cancer
ssc05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    100037976 (TNFSF11)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100037976 (TNFSF11)
 09150 Organismal Systems
  09152 Endocrine system
   04917 Prolactin signaling pathway
    100037976 (TNFSF11)
   04928 Parathyroid hormone synthesis, secretion and action
    100037976 (TNFSF11)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    100037976 (TNFSF11)
 09160 Human Diseases
  09161 Cancer: overview
   05207 Chemical carcinogenesis - receptor activation
    100037976 (TNFSF11)
  09162 Cancer: specific types
   05224 Breast cancer
    100037976 (TNFSF11)
  09163 Immune disease
   05323 Rheumatoid arthritis
    100037976 (TNFSF11)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ssc04052]
    100037976 (TNFSF11)
   04090 CD molecules [BR:ssc04090]
    100037976 (TNFSF11)
Cytokines and neuropeptides [BR:ssc04052]
 Cytokines
  Tumor necrosis fators
   100037976 (TNFSF11)
CD molecules [BR:ssc04090]
 Proteins
  100037976 (TNFSF11)
SSDB
Motif
Pfam: TNF DisA DUF6264
Other DBs
NCBI-GeneID: 100037976
NCBI-ProteinID: XP_001925729
Ensembl: ENSSSCG00000009429
Vega: OTTSUSG00000002153
UniProt: A0A4X1VGW4
Position
11:complement(24468011..24505421)
AA seq 319 aa
MRRASRDYTKYLRGSEEMGGGGSGAPHEGPLHAPPPPAPPHQPAAASRFTFMALLGLGLG
QVVCSVALFLYFRAQMDPNRISEDDTHCINRIFQLHENTDLQDTTLESQDSKLIPDSCKR
IKQAFQAAVQKEMQHIVKSQHIRAEKAMVEGSWLDLSRRNKPETQPFAHLTINATDIPSG
SHKVSLSCWYHDRGWAKISNMTFSNGKLIVNQDGFYYLYANICFRHHETSGNLDAKYLQL
MVYVTKTSIKIPSSHTLMKGGSTKYWSGNSEFHFYSINVGGFFKLRSGEEISIEVSNHSL
LDPDQDATYFGAFKVRDID
NT seq 960 nt   +upstreamnt  +downstreamnt
atgcgccgcgccagccgagactacaccaagtacctgcgcggctccgaggagatgggcggc
ggcggctccggcgccccgcacgagggccccctgcacgccccgccgccgcccgcgccaccg
caccagcccgccgccgcctcccgcttcacgttcatggccctcctggggctggggctgggc
caggtggtgtgcagcgtcgccctgttcctctacttccgagcgcagatggatcctaataga
atatcagaagatgacactcactgcattaatagaattttccaactccatgaaaacacggat
ttgcaagacacaactctggagagtcaagactcaaaattaatacctgattcgtgtaagaga
attaaacaggcctttcaagcagctgtgcaaaaggaaatgcagcatattgttaaatcacaa
cacatcagagcagaaaaagccatggtggaaggttcatggttagatctgagcagaaggaat
aagcctgagactcagccctttgcccacctcacgatcaacgccacagacatcccatccggt
tcccacaaagtgagtctgtcctgctggtatcatgaccgaggttgggccaagatctccaac
atgactttcagcaacgggaaactaatagttaaccaagacggcttttattacctgtatgcc
aacatctgctttcgacatcacgaaacttcaggaaacctcgatgcgaagtatcttcagctg
atggtgtatgtcaccaaaaccagcatcaaaatcccgagttctcacactctgatgaaagga
ggaagcaccaaatactggtcagggaattctgaattccatttttactccataaatgttgga
ggattttttaagctacgatctggcgaggaaatcagcattgaggtatccaaccattcactt
ctggatccagaccaagacgccacgtactttggggcttttaaagttcgagatatagactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (28)   

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