KEGG   Sus scrofa (pig): 100049688
Entry
100049688         CDS       T01009                                 
Symbol
TNFRSF11B
Name
(RefSeq) LOW QUALITY PROTEIN: tumor necrosis factor receptor superfamily member 11B
  KO
K05148  tumor necrosis factor receptor superfamily member 11B
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04060  Cytokine-cytokine receptor interaction
ssc04380  Osteoclast differentiation
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100049688 (TNFRSF11B)
 09150 Organismal Systems
  09158 Development and regeneration
   04380 Osteoclast differentiation
    100049688 (TNFRSF11B)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04050 Cytokine receptors [BR:ssc04050]
    100049688 (TNFRSF11B)
Cytokine receptors [BR:ssc04050]
 Tumor necrosis factor receptors
  TNF receptor superfamily
   100049688 (TNFRSF11B)
SSDB
Motif
Pfam: TNFR_c6 Death
Other DBs
NCBI-GeneID: 100049688
NCBI-ProteinID: XP_003481394
Ensembl: ENSSSCG00000020707 ENSSSCG00000027762
Vega: OTTSUSG00000000796 OTTSUSG00000002973
UniProt: A0A480Z5F1 A0A8D1H0K7
Position
4:19850212..19879132
AA seq 401 aa
MNKLLCCALVFLDISIKWTTQETFPPKYLHYDPETSKQLMCDKCPPGTSLKQHCTARRKT
VCAPCPDHYYTDSWHTSDECLYCTPVCKELQYVKQECNRTHNRVCECEEGRYLELEFCLK
HRSCPPGFGVLHAGTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSALGLLLTQKGNAT
HDNICSXNSESTHKCGIDVTLCEEAFFRFAVPTKLTPNWLSVLVDNLPGTKLNAEXVERI
KRRHSSQEQTFQLLKLWKHQNKDQDMVKKIIQGIDLCENSVQKHIGHMNLTFEQLRILMQ
SLPGKKVPTEDIEETVKMCKSSEQILKLLSLWRIKNGDQDTRKGLMHALKHLKTYHFPKT
VTQSLKKIIRFLHSFTMYRLYQKLFLEMIGNQVQSVKISCL
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgaacaagctgctgtgctgtgcgctcgtgttcttggacatctccattaaatggaccacc
caggaaacttttcctccaaagtaccttcattatgacccagaaacctctaagcaactgatg
tgcgacaaatgtcctcctggcacctccctaaaacagcactgcacggcaaggcggaagacc
gtgtgtgccccctgtcctgaccactattacacagacagctggcacaccagtgacgagtgt
ctgtactgcaccccagtgtgcaaggaactgcagtacgtcaagcaggaatgcaatcgcacc
cataaccgcgtgtgtgaatgcgaggaggggcgctacctggagctagagttctgcttgaag
cacaggagctgtcctcctggatttggagtgctacacgcaggaactccagagcgaaataca
gtttgcaaaagatgtccagatggattcttctcgaatgagacgtcatctaaagccccctgt
agaaaacacacaaactgcagtgcattggggctccttctaactcagaaaggaaatgcaact
catgacaacatatgttctnggaacagtgaatcgactcacaaatgtggaatagatgtaacc
ctgtgtgaggaggcgttcttcaggtttgctgttcctacaaagcttacccctaattggctc
agtgtcttggtagacaatttgcctggcaccaaactaaatgcagaangtgtggagaggata
aaacgacgacacagctcacaagaacagacttttcagctgctgaagttatggaaacatcaa
aacaaagaccaagacatggtcaagaagattatccaaggtatcgacctctgtgaaaacagt
gtgcagaagcatatcgggcacatgaacctcaccttcgagcagcttcgaatcttaatgcaa
agcttgcccgggaagaaagtcccgacagaagacatcgaggaaacagtgaagatgtgcaaa
tcgagtgagcagatcctgaagctgctcagcctgtggagaattaaaaacggtgaccaggac
acccgcaagggcctgatgcacgccctgaagcatctcaagacgtaccacttccccaaaacc
gtcacacagagtctgaagaaaatcatcaggttcctgcacagcttcaccatgtacagactc
tatcagaagctgtttttagaaatgatagggaaccaggtccaatcagtaaagataagctgc
ttataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (2)   
   OC (1)   
   VEGA (2)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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