KEGG   Sus scrofa (pig): 100125838
Entry
100125838         CDS       T01009                                 
Symbol
NOD2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2
  KO
K10165  nucleotide-binding oligomerization domain-containing protein 2
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04621  NOD-like receptor signaling pathway
ssc04668  TNF signaling pathway
ssc05152  Tuberculosis
ssc05321  Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04668 TNF signaling pathway
    100125838 (NOD2)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    100125838 (NOD2)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05152 Tuberculosis
    100125838 (NOD2)
  09163 Immune disease
   05321 Inflammatory bowel disease
    100125838 (NOD2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:ssc04054]
    100125838 (NOD2)
Pattern recognition receptors [BR:ssc04054]
 Cytoplasmic pattern recognition receptors
  NOD-like receptors
   100125838 (NOD2)
SSDB
Motif
Pfam: NACHT CARD LRR_6 NLRC4_HD2 NOD2_WH LRR_4 AAA_16 AAA_29 NB-ARC AAA_30 AAA_25 AAA_22 G-alpha DAP3 ABC_tran Sigma54_activat nSTAND3 AAA_7
Other DBs
NCBI-GeneID: 100125838
NCBI-ProteinID: NP_001098765
UniProt: A7VJM2
Position
6:complement(34132127..34167446)
AA seq 1013 aa
MCAQGAFQAQRSQLVELLVSGSLEGFESILDWLLSWDVLSWEDYEGLSLLGQPLSHLARR
LLDTVWSKGTWGCEQLVAAVREAQADSQPSELPGCWNPHSPHPARDLQSHRPAVVRRLYS
HVDGVLERTQEQGFISRYECDEIRRPIFTSCQRARRLLDLAAVKANGLAAFLLQCVQELP
IPVALPFEDAACKKYMSKLRTTVSAQSRFLSTYDGAENLCLEEIYTENVLEVRTEGGMTG
PPQQSPATLSLGELFSPQGHLNKDADTVLVVGEAGSGKSTLLQQVHLLWASGQAFQEFLF
VFPFSCRQLQCLAKSLSLQTLLFEHCCWPDRGQQDVFQVLLDHPERILLTFDGFDEFRFR
FTDHERHCCPTAPTSVQSLLFNLLQGNLLKNARKVLTSRPDAVSASLRKHVRSELSLKGF
SEEGIELYLRKCHREPGVADRLICLLRATSALHGLCHLPVFSWMVSKCHQELLLQGRGSP
KTTTDMYLLILQHFLLRASPLDSAAQHLGPDLLRGSLPTLLHLGHLALWGLGTCCYVFSA
EQLQAAHVDSEAVSLGFLVRAKSVVPGGTPPLEFLHVTFQCFFAAFYLALSADVPPSSLR
HLFHGHRPGSSPLAKVLPKLCVRGSGCKKSSVAHLLQEAEPHNLQITAASLAGLLSQEHR
GLLAECQVSEKALLQRQACARWCLARSLHKHFRSIPPAVPGEVKSMHAMPGFIWLIRSLY
EMQEERLARDAVRRLNVGHLKLTFCSVGPAECAALAFVLRHLQWPVALQLDHNSVGDIGV
EQLLPCLNVCKALYLRDNNISDRGFCKLVEHALCCEQLQKLALFNNKLTDGCAHSMARLL
ACKRNFLALRLGNNHFTAVGAQVLAQGLRANTPLQFLGFWGNQVGDKGAQALAEALRDNQ
SLKWLSLVGNNIGSVGAQALALMLEKNMALEELCLEENHVQDEGVCSLARGLERNSSLKV
LKLSNNHVTSRGAEALLQALEQNDTILEVWLRGNNFSPEETEQLSQRDTRLLL
NT seq 3042 nt   +upstreamnt  +downstreamnt
atgtgtgcccagggggctttccaggcacagagaagccagctggtggagctcctggtctcg
gggtccctcgagggcttcgagagcattctggactggctgctgtcctgggacgtcctctcc
tgggaagactacgagggcctcagcctcctgggccagcccctctcccacttggccaggcgc
cttctggacactgtctggagtaagggtacgtggggctgtgagcagctcgtggcggctgtg
cgggaggcccaggccgacagccagccctccgaacttcctggctgctggaacccccattca
ccccacccagcccgtgacctgcagagtcaccggccagccgttgtcagaagactctacagt
cacgtggacggcgtgttggagcggacgcaggagcagggtttcatcagccggtacgaatgt
gatgaaatcaggcgacccatcttcacgtcatgccagcgggcaagaaggctcctcgatctt
gctgctgtgaaggcgaatgggttggctgccttccttctacagtgtgttcaggaattaccc
atcccagtggccctgccttttgaagatgctgcctgtaagaagtacatgtccaagctgagg
accacagtttcagctcagtctcgtttcctgagcacctacgatggggcagagaatctttgc
ctagaagaaatatatacagagaatgttctggaggtccggacagaggggggcatgactgga
cctccgcagcagagccctgccaccctgagcctaggggagctcttcagccctcaaggccac
ctcaacaaggatgcggacaccgtgctggtggtgggtgaggcaggcagtggcaagagcacc
ctcctgcagcaggtgcatctgctgtgggcttcagggcaggccttccaggaatttctcttc
gtcttcccattcagctgccggcagctgcagtgcctggcaaaatctctgtccctgcagacg
ctgctctttgaacactgttgttggcctgaccgtggccagcaggacgtctttcaggtcctc
cttgaccaccccgagcgcatcctcttaactttcgatggttttgacgagttcaggttcagg
ttcacggatcacgagcgtcactgctgtccgacggcccccacatctgttcagagtctcctc
ttcaacctcctgcagggcaacctgctcaagaatgcccgcaaggtgctgaccagccgaccg
gacgcggtgtctgcgagcctccggaagcacgtgcgctcagaactcagcctcaagggtttc
tcagaagagggcattgaactgtacctgcggaagtgccatcgcgagcctggcgtggccgac
cgcctcatctgcctgctcagagccacctcggccctgcacggtctgtgccacctgcctgtc
ttctcgtggatggtgtccaaatgccaccaggaactgttgctgcagggcagggggtccccg
aagaccaccacggacatgtacctgctgatcctgcagcattttctgctgcgtgcctcccct
ctagactcagccgcccagcatctgggacctgacctgcttcgggggagcctccccaccctg
ctgcatctcggtcacctggctctctggggcctgggcacgtgctgctacgtgttctcagcc
gagcagctgcaggcagcacacgtcgacagtgaggctgtttctcttggcttcctggttcgt
gccaagagcgttgtgcccggaggtacccccccactggaattcctgcacgtcacattccag
tgcttttttgccgcattctacctcgccctcagtgctgacgtgccaccgtcatccctcaga
cacctcttccatggtcaccgacccggcagctcgccactggccaaggtgctgcccaaactg
tgtgtgcggggctcaggctgcaagaaaagcagcgtggcccatttgctacaggaggccgag
ccgcacaacctccagatcacggcggcctccctggcagggctgttgtcccaggagcaccgg
ggtctgctagccgagtgccaggtgtctgagaaggctctgctccagcgccaggcctgtgcc
cggtggtgtctggcccgcagcctccataagcacttccgctccatcccaccagccgtccca
ggtgaggtcaagagcatgcatgccatgcctggcttcatctggctcatccgcagcctgtac
gagatgcaggaggagcgactggcccgggacgctgtgcgtaggctgaacgtcgggcacctc
aagctgactttctgcagcgtgggccctgctgagtgcgctgccctggccttcgtgctgcgg
cacctccagtggcccgtggccctgcagctggaccacaactctgtgggcgacattggcgtg
gagcagctgctgccttgtctcaacgtctgcaaggctctttacttgagagataacaatatc
tcagaccgaggcttctgcaagctcgtggaacatgctctttgctgtgagcagctgcagaag
ttagctcttttcaacaacaaattgaccgacggctgtgctcactccatggccaggctcctt
gcatgcaagaggaacttcttggcattgaggctgggaaacaaccacttcactgccgtggga
gcccaggtgctggcccagggactcagagccaacacccccctgcagttcctggggttctgg
ggcaaccaggtgggtgacaagggggcccaggctttggctgaagccttgagggacaatcag
agcttgaagtggctcagcctggtggggaacaacattggcagtgtgggtgctcaagcctta
gcattgatgttggaaaagaacatggccctggaagaactctgcctggaggagaaccatgtc
caagatgaaggtgtgtgctctctcgccagaggacttgagagaaattcaagcttgaaagtc
ctgaagctgtccaacaaccacgtcacctcccgtggggccgaagccctcctgcaggccctt
gaacagaatgacaccatcctggaagtctggctccgaggaaacaatttctctccagaggag
actgagcagctcagccagagggacacgagactcctgctttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (18)   
   Pfam (18)   
All databases (73)   

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