KEGG   Sus scrofa (pig): 100127162
Entry
100127162         CDS       T01009                                 
Symbol
TNFSF13
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13
  KO
K05475  tumor necrosis factor ligand superfamily member 13
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04060  Cytokine-cytokine receptor interaction
ssc04672  Intestinal immune network for IgA production
ssc05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100127162 (TNFSF13)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    100127162 (TNFSF13)
 09160 Human Diseases
  09163 Immune disease
   05323 Rheumatoid arthritis
    100127162 (TNFSF13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100127162 (TNFSF13)
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ssc04052]
    100127162 (TNFSF13)
   04090 CD molecules [BR:ssc04090]
    100127162 (TNFSF13)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     100127162 (TNFSF13)
Cytokines and neuropeptides [BR:ssc04052]
 Cytokines
  Tumor necrosis fators
   100127162 (TNFSF13)
CD molecules [BR:ssc04090]
 Proteins
  100127162 (TNFSF13)
SSDB
Motif
Pfam: TNF LapA_dom
Other DBs
NCBI-GeneID: 100127162
NCBI-ProteinID: NP_001106160
UniProt: A0A8D1ZAX8 A9Q6C0
Position
12:52853646..52857033
AA seq 251 aa
MPASSPSLPAPKGPLGDMAPIREPARSVALWLSWGAALGAVACAMVLLTQQTELQTLRRE
VTRLQRTGGPSEKGEGDPWQNLWEQEQSPDGAEAWENGERSRRRRAVLTRKQKKKRSVLH
LVPTNITSKEDSDVTELMWQPALKRGRGLEAQGYFVRVWDAGVYLLYSQVLFHDVTFTMG
QVVSREGQGRQETLFRCIRSMPSNPDWAYNSCYSAGVFHLHQGDILSVVIPRARAKLSLS
PHGTFLGVVKL
NT seq 756 nt   +upstreamnt  +downstreamnt
atgccagcctcatctccttccttgccagcccctaaagggcccctgggagacatggccccc
atccgagagccggctcgctccgttgccctctggttgagttggggggcggctctgggggct
gtggcttgtgccatggttctgctgacccaacaaacagagctgcaaaccctaaggagagag
gtgacccggctgcagaggaccggagggccctccgagaagggggaaggggatccatggcag
aacctctgggagcaggaacagagccctgacggcgcggaagcctgggagaacggggagaga
tcccggagaaggagagccgtgctcacccgtaaacagaagaagaagcgctcagttctgcat
ctcgttcccactaacatcacctccaaggaggactcggatgtgacagaactcatgtggcaa
ccagctctcaagcgtgggagaggtctggaggcccaaggatactttgttcgagtctgggat
gctggagtttatctgctgtacagccaggtcctgtttcacgatgtgactttcaccatgggt
caggtggtatctcgggagggccagggaaggcaggagactctattccgatgtattcgaagt
atgccctccaaccccgactgggcctacaatagctgctacagtgcaggtgtgttccattta
caccaaggggacattctgagtgttgtgatcccccgggccagggcgaaactcagtctctct
ccacatggaaccttcctgggagttgtgaaactgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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