KEGG   Sus scrofa (pig): 100134857
Entry
100134857         CDS       T01009                                 
Symbol
NCF1
Name
(RefSeq) neutrophil cytosol factor 1
  KO
K08011  neutrophil cytosolic factor 1
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04062  Chemokine signaling pathway
ssc04145  Phagosome
ssc04380  Osteoclast differentiation
ssc04613  Neutrophil extracellular trap formation
ssc04666  Fc gamma R-mediated phagocytosis
ssc04670  Leukocyte transendothelial migration
ssc05020  Prion disease
ssc05140  Leishmaniasis
ssc05208  Chemical carcinogenesis - reactive oxygen species
ssc05415  Diabetic cardiomyopathy
ssc05417  Lipid and atherosclerosis
ssc05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100134857 (NCF1)
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    100134857 (NCF1)
   04666 Fc gamma R-mediated phagocytosis
    100134857 (NCF1)
   04670 Leukocyte transendothelial migration
    100134857 (NCF1)
   04062 Chemokine signaling pathway
    100134857 (NCF1)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    100134857 (NCF1)
 09160 Human Diseases
  09161 Cancer: overview
   05208 Chemical carcinogenesis - reactive oxygen species
    100134857 (NCF1)
  09174 Infectious disease: parasitic
   05140 Leishmaniasis
    100134857 (NCF1)
  09164 Neurodegenerative disease
   05020 Prion disease
    100134857 (NCF1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    100134857 (NCF1)
   05418 Fluid shear stress and atherosclerosis
    100134857 (NCF1)
   05415 Diabetic cardiomyopathy
    100134857 (NCF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100134857 (NCF1)
Membrane trafficking [BR:ssc04131]
 Others
  NADPH oxidases (Nox) and associated proteins
   Nox associated proteins
    100134857 (NCF1)
SSDB
Motif
Pfam: SH3_1 NCF1_PBR_AIR SH3_2 SH3_9 p47_phox_C PX SH3_3 hSH3
Other DBs
NCBI-GeneID: 100134857
NCBI-ProteinID: NP_001106691
Ensembl: ENSSSCG00000007722
UniProt: A9YUA7 A0A8D1K1D7
Position
3:11820367..11834394
AA seq 392 aa
MGDPFIRHIALLGFEKRFVPSQHYVYMFLVKWQDLSEKLVYRRFTEIYEFHKTLKQMFPI
EAGDITPENRIIPHLPAPRWFDGQRVAESRQGTLSEYCSALMSLPVKISRCPHFLNFFKV
RPDDLKLPADNQVKKPETYLMARDGKNNIADITGPIILQTYRAIASYEKNSRSEMTLATG
DVVDVVEKNENGWWFCQMKTKRGWVPASYLEPLDSPDESEDPEPNYEGEPYVTIKSYTAL
LEDEVSLEQGETIEVIHKLLDGWWVVRKEDITGYFPSMYLQKAGQDVAEAQSKIKSRGAP
PRRSSIHNAHSIHQRSRKRISQDAYRRNSVRFLQQRQRQPRSGPQRAGNPLQKEQPKTER
PKPQPAVPPRPSADLILHRCSESTKRKLASAV
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgggggaccccttcatccgccacatcgccctcctgggcttcgaaaagcgcttcgtcccc
agccagcactacgtctacatgttcctggtgaagtggcaggacctgtctgagaagctggtc
taccggcgcttcactgagatctacgaattccacaaaaccttaaagcagatgtttcccatc
gaggccggggacatcaccccggagaacaggatcatcccccacctgccagccccacgttgg
tttgatgggcagcgggtggccgagagccgccagggcaccctcagtgaatactgcagcgcg
ctcatgagcctgcctgtcaagatctcccgctgcccccacttcctcaacttcttcaaggtg
cgtcccgacgacctcaagctccctgcggacaaccaggtgaaaaagcccgagacatacctg
atggccagagatggcaagaataacattgcagacatcacaggccccatcatcctgcagacg
taccgcgccatcgccagctacgagaagaactcacgttccgagatgactctggccacgggc
gacgtggtggatgtcgtggagaagaacgagaatggctggtggttctgccaaatgaagaca
aagcgtggctgggttccggcgtcctacttggagcccctggacagtcctgatgaatcagag
gatccagagcccaactatgaaggtgagccctacgtcaccatcaaatcctacactgccctc
ttggaggacgaggtgtccttggagcagggggagaccatcgaggtcattcataagctcctg
gatggctggtgggtcgtcaggaaagaagacatcacaggttacttcccatccatgtacctg
cagaaggcaggacaggacgtagccgaggcccaaagcaagatcaagagccgtggagcaccg
ccccggaggtcctccatccacaacgcgcacagcatccaccagcggtcgcggaagcgcatc
agccaggacgcctatcggcgcaatagcgttcgttttttgcagcagcgccagcgtcagccg
cgctcggggcctcagagagcggggaatccattgcaaaaggagcagcccaagaccgagcgc
cccaagccgcaaccagccgtgcccccgaggcccagcgccgacctcatcttgcaccgttgc
agcgagagcaccaagcggaagctggcatccgctgtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (12)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (8)   
   Pfam (8)   
All databases (50)   

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