KEGG   Sus scrofa (pig): 100135667
Entry
100135667         CDS       T01009                                 
Symbol
NLRC5
Name
(RefSeq) protein NLRC5
  KO
K22615  NLR family CARD domain containing 5
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:ssc04054]
    100135667 (NLRC5)
Pattern recognition receptors [BR:ssc04054]
 Cytoplasmic pattern recognition receptors
  NOD-like receptors
   100135667 (NLRC5)
SSDB
Motif
Pfam: Atypical_Card NACHT LRR_6 LRR_4 NLRC4_HD2 LRR_8 AAA AAA_16 AAA_22 nSTAND3 NOD2_WH AAA_33 RsgA_GTPase
Other DBs
NCBI-GeneID: 100135667
NCBI-ProteinID: NP_001265710
UniProt: M4MEX3
Position
6:18933179..19036288
AA seq 1846 aa
MDPISRHLGTKNLWGWLVRLLCKHSEWLSAKVKFFLPNMDLGARNEASDPTQRVVLQLRK
LRTQSQITWQAFIHCVCMELDVPLDLEVLLLSTWGHGEGLPSQLEADEEHPPESQPHSGL
KRPHQSCGPSPRPKQCRKQQRELAKRYLQLLRTFAQQRYDSRSPGPGQPVACHRTYIPPI
LQWNRASVPFDTQEGTVAGGPKAEDGTDVSIRDLFSAKANKGPRVTVLLGKAGMGKTTLA
HRLCQEWADGQLERFQALFLFEFRQLNLITNFLMLPQLLFDLYLRPEAGPEAVFQYLEEN
ANKILLIFDGLDEVLHPGSSKEAADPEASASALTLFSRLCHGTLLPGCWVMTTSRPGKLP
ACLPTEVVTVSMWGFDGPRVEEYVSRFFSDQPVQEAALAELRASWHLWSMCVVPALCQVA
CLCLHHLLPGRSPGQSAALLPTVTQSYVQMVLSLSPQGFLPAESLMGLGEVALWGLETGK
VVFTAGDIPPPTMAFAAALGLLTSFCVYTEPGHQETGYVFTHLSLQQFLAALHLMASPKV
DRDTLAQHVTLNSRWVLRTKARLGLLDHHLPTFLAGLASCACHPFLTPLAQQEEVWVRAR
QAAVMQALEKLATRKLTGPKLIELCHCVAETQKPELASLVAQSLPHHLSFRNFLLTYADL
AALTNILGHRDAPIHLDFEGCPLEPHCPEALAGCEQVENLSFKSRKCGDAFAEALSRSLP
TMGSLKKLGLSGSRITARGISHLVRALPLCPQLEEVSFQDNQLKDGEVLNIVEILPHLPQ
LRMLDLSRNSVSVSTLLSLTKVAVTYPTIRKLQVRETDLVFLLSPPTEMTTELQRDPDLQ
ENASQRKEAQRRSLELRLQKCQLSVYDVKLLLAQLRMGPQLDEVDLSGNQLEDEGCQLVA
EAAPQLHIARKLDLSDNGLSVAGMQRVLSAVRTCRTLAELHISLLHKTVVLMFAPEPEEQ
EGIQKRLTHCGLQAQHLEQLCKALGGSCHLKYLDLSGNALGDEGVALLAQLLPGLGALQL
LNLSENGLSLDAVFSLTQCFSTVRWLQRLDFSSESQHVILSGDSRGRHLLAGGSLPEFQA
GAQFLGFRQRRIPRSFCLKECQLEPPSLSRLCETLEKCPGPLEVELFCKVLSDQSLETLL
HHLPRLPQLSLLQLSQTGLSQRSPLLLADLFSLYPRVQKVDLRSLHHMTLHFRFSEEQEG
GCCGRFTGCGLSQEHMEPLCWSLSKCEDLSQLDLSANLLGDDGLRSLLECLPQVPISGSL
DLSHNGISQESALRLVETLPSCPRVREASVNPGSKQTFWIHFSRKEEARKTLRLSECSFR
PEHVPRLATGLSQALQLTELTLNQGCLGLEQLTILLGLLKWPAGLLTLRVEEPWVGRAGV
LTLLEVRAHASGNVTEISISETQEQLCMQLEFPHQENPEAVALRLAHCDLGTHHSLLVRE
LMETCARLRQLSLSQVKLCKASSLLLQSLLLSLSELKNFRLTSSCVSSDGLAHLTFGLSH
CHHLEELDLSNNQFGKEDTKVLMGALEGKCWLKRLDLSHLPLSSSTLAALIQGLSHMSLL
QSLRLSRSGVDDIGCCHLSEALRAATSLVELGLSHNQIGDAGAQHLAAILPGLPELRKID
LSANGIGPAGGVRLAESLTLCEHLEELMLDYNALGDLTALGLARGLPQHLRVLHLRSSHL
GPEGALSLGQALDGCPYVEEINLAENSLAGGIPHFCQGLPMLRQIDLMSCEIDNQTAKPL
AASFVLCPALEEIMLSWNLLGDEAAAELAQVLPRMGRLKRVDLEKNRITAHGAWLLAEGL
AQGSGIQVIRLWNNPIPQDTAQHLQSREPRLDFAFFDHQPQVPWDA
NT seq 5541 nt   +upstreamnt  +downstreamnt
atggaccccattagtcgccacctgggcaccaagaacctgtggggatggctcgtgaggctg
ctctgcaaacactcagaatggctgagtgccaaggtgaagttcttcctccccaacatggac
ctgggtgccaggaacgaggcctcagaccccacacagagggtcgtcctacaactcagaaaa
ctgcgtacccagagtcagatcacctggcaggcgttcatccactgtgtgtgcatggagctg
gacgtgccgctggacctggaggtactgctgctgagcacctggggccacggagaagggctc
cccagtcagctggaagctgatgaggagcacccacctgagtctcagccccactctggcctc
aagcggccacatcagagctgtgggccctcccctcgcccaaagcagtgcaggaagcagcag
cgagaactggccaagaggtacctgcagctgctgagaacgtttgcccagcagcgttacgac
agcaggagccctgggccaggacagccggtcgcctgccaccgaacctacatcccgcccatc
ttgcaatggaaccgagcctctgtgcccttcgacactcaggaggggactgttgcagggggc
cccaaggcagaagatggcacggatgtgagcattcgggacctcttcagtgccaaagccaac
aagggcccgagagtcacggtgcttctgggaaaggcgggcatgggcaagaccacgctggcc
caccggctctgccaagagtgggccgatggtcagctggagcgcttccaggccctgttcctt
ttcgaattccgccagctcaacctgatcacaaacttcctgatgctgccacagctccttttt
gatctgtacctgaggcccgaggcgggcccagaggcagtcttccagtacctggaggagaat
gctaataaaatcctgctcatctttgatgggctggacgaggtcctccaccccggctccagc
aaggaggctgcagatcctgaggcctcggcgtcagccctcaccctcttctcccgcctctgc
catgggaccctcctgcccggctgctgggtcatgaccacctcccgtccagggaagctgccc
gcctgcctgcccacagaggtggtcacggtcagcatgtggggctttgacggaccacgggtg
gaggagtacgtgagccgcttcttcagcgaccagccagtccaggaggcggccctcgcggag
ctgcgggccagctggcatctctggagcatgtgtgtggtgcccgcgctgtgccaggtcgcc
tgcctctgcctccaccatctgctcccaggccgctctccaggccagtctgcagccctcctg
cccaccgtgacccagagctacgtgcagatggtgctttccctcagcccccaagggttcctg
cctgccgagtccctgatgggcctcggggaggtggccctgtggggcctggagacggggaag
gttgtcttcactgcaggagacatccctccacccacgatggccttcgcggcggccctcggc
ctgctcacctccttctgtgtgtacacggaacccgggcaccaggagacaggctacgtcttc
acccacctcagcctgcagcagtttttggctgccctgcacctgatggccagccccaaggtg
gacagagacacacttgcccaacatgtcaccctcaattctcgctgggtgctgcggaccaaa
gctaggctgggcctcttagaccaccaccttcccacctttctggccggcctggcctcctgc
gcctgccaccccttcctcacacccctggcacagcaggaggaggtgtgggtgcgtgccagg
caggcggcagtcatgcaagccttggagaagttggccactcgcaagctgacggggccaaag
ctgatagagctatgtcactgcgtggctgagacacagaagccggagctggccagcctcgtg
gcccagagcctcccccatcacctctccttccgcaactttctgctgacctatgccgacctg
gctgccctgaccaacatcctcgggcacagggatgcccccatccacctggattttgagggc
tgccccttggagccacactgtcctgaagccctggcaggctgcgagcaggtggagaatctc
agctttaagagcaggaagtgtggggatgcctttgctgaagccctctccaggagtttgcca
acaatggggagcctgaagaagctggggttgtcaggaagtaggatcactgcccgaggcatc
agccacctggtgcgggctttgcccctctgtccacagctggaagaggtcagctttcaggac
aaccagctcaaggacggggaggtcctgaacatcgtggaaatacttccccacctgccgcag
ctccggatgcttgacctgagccgcaacagtgtctccgtgtcaactctcctctccttgaca
aaggtggcagtcacgtaccctaccattaggaagctgcaggtcagggagacagacctcgtc
ttccttctctccccacctacagagatgaccacagagctacaaagagacccagacctacag
gaaaatgccagccagaggaaagaggctcagaggagaagcctggagctcaggctccagaag
tgtcagctcagtgtctatgatgtgaagctgctcctcgcccagctccggatgggtccacag
ctggatgaagtggacctctcagggaaccagctggaagatgaaggctgtcaactggtggca
gaggctgcgccccagctgcacattgccaggaagctggacctcagcgacaatgggctttct
gtggctgggatgcaacgtgtgctgagtgcagtgagaacctgccggaccctggcagagcta
cacatcagtctgctgcacaaaaccgtggtgctcatgtttgccccagaaccagaggagcag
gaggggatccagaagaggctgacacattgtggcctgcaagcccagcaccttgagcagctc
tgcaaagcgctgggaggaagttgccacctcaagtacctcgatttatcaggcaatgctctg
ggggacgaaggtgtggccctgctggctcagctgctccccgggcttggtgccctgcagctg
ctgaacctcagtgagaacggtttgtccctggatgctgtgttcagtttgacccagtgcttc
tctacagtgcggtggcttcagcgcttggacttcagctctgagagccagcacgtcatcctg
agcggtgacagcagaggcaggcatctcttggctggcggatctttgccagagtttcaagct
ggagcccagttcttggggttccgtcagcgccgcatccccaggagcttctgcctcaaggag
tgtcagctggagcccccgagcctctcccgcctctgtgagactctggagaagtgcccgggg
cctctggaagtcgaattgttctgcaaggtcctgagtgaccagagcctggagaccctgctg
catcaccttccccggctcccccaactaagcctgctgcagctgagccagacgggactgtcc
caaaggagccccctcctgctggccgacctcttcagcctgtacccacgggttcagaaggtg
gatctcaggtccctccatcacatgactctgcacttcaggtttagcgaggagcaggaaggc
ggatgctgtggcaggttcacaggctgtggcctcagccaggagcacatggagccgctgtgt
tggtcgctgagcaagtgtgaggacctcagccaactggacctctccgccaacctgctgggt
gatgacgggctcaggtccctcctggaatgtctccctcaggtgcccatctccggttcgctt
gatctgagtcacaacggcatctctcaggaaagtgccctccgcctggtggaaacccttccc
tcctgcccacgtgtccgggaggcctcggtgaacccgggctccaagcagaccttctggatt
cacttctcccgaaaggaggaggctaggaagacactaaggctgagtgagtgcagcttcagg
ccagagcacgtgcccagactggccaccggcctgagccaggccctgcagctgacagagctc
acgttgaaccagggctgcctgggcctggagcagctgactatcctcctgggcctgctgaag
tggccggcggggctgctgactctcagggtagaggagccgtgggtgggcagagccggagtg
ctcaccctgctggaagtccgtgcccacgcctcaggcaacgtcactgaaataagcatctct
gagacccaggagcagctctgtatgcagctggaatttccccatcaggagaacccagaagcc
gtggccctcaggttggctcattgtgatctcgggacccaccacagcctccttgtcagggag
ctaatggagacatgcgccaggctgcggcagctcagcttgtcccaggtgaagctctgcaag
gccagctctctgctgctgcaaagcctcctgctgtccctctctgagctgaagaacttccgg
ctgacctccagctgtgtgagctctgatgggctagcccacctgacatttggtctgagccat
tgtcaccacctggaggagctggacttgtctaacaatcaatttggcaaggaggacaccaag
gtgctgatgggagcccttgagggcaaatgctggctgaagaggcttgacctcagccacttg
cctctgagcagctccaccctggccgcgctcattcaaggactgagccacatgagcctcctg
cagagcctccgtctaagcaggagcggcgttgatgacatcggctgctgccacctctccgag
gcgctcagagctgccaccagcttggtggagctgggcttgagccacaaccagatcggagac
gccggtgcccagcacttagctgccatcctgccagggctgcctgagctcaggaagatagac
ctctcagccaatggcatcggcccggcagggggagtgcggttggcggagtccctcaccctt
tgcgagcacctggaggagctgatgcttgactacaatgctctgggagatctcacagccctg
gggctggcccgagggttgcctcagcacctgagggtcctgcacctgcggtccagccacctg
ggcccagagggggcgctgagcctgggccaggcactggatggatgcccatacgtggaagag
atcaacttggccgagaacagcctggctggagggatcccacatttctgtcaggggctcccg
atgctccggcagatagacctgatgtcatgtgagattgacaaccagactgccaagcccctc
gccgccagcttcgtgctctgcccagccctggaagaaatcatgctgtcctggaatctgctc
ggtgacgaggcagctgctgagctggcccaggtcctgccgcggatgggccgactgaagaga
gtggacctggagaagaatcggatcacagctcacggagcctggctcctggctgaagggctg
gctcagggctctggcatccaagtcattcgcctgtggaataaccccatcccccaggacacg
gcccagcatctgcagagccgggagcccaggctggactttgctttcttcgaccatcagcca
caggtcccctgggatgcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (74)   
   KEGG ORTHOLOGY (1)   
   RefGene (70)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (15)   
   RefSeq(nuc) (5)   
   GenBank (5)   
   EMBL (5)   
Protein domain (13)   
   Pfam (13)   
All databases (111)   

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