KEGG   Sus scrofa (pig): 100137084
Entry
100137084         CDS       T01009                                 
Symbol
LIMA1
Name
(RefSeq) LIM domain and actin-binding protein 1
  KO
K23026  LIM domain and actin-binding protein 1
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ssc04812]
    100137084 (LIMA1)
Cytoskeleton proteins [BR:ssc04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     100137084 (LIMA1)
SSDB
Motif
Pfam: LIM
Other DBs
NCBI-GeneID: 100137084
NCBI-ProteinID: NP_001108148
Ensembl: ENSSSCG00000030600
UniProt: B0KYV5
Position
5:complement(16074436..16177122)
AA seq 756 aa
MESTPFNRQQWTSLSLRVTAKELSLVNKNKSSAIVEIFSKYQKAAEEANMEKRRSNTENL
PQHFRRGNLTVLKKKWENPAPGVESLPESTRNSSAEVRHRGDPPPAEVASSSASGVEADQ
GVCPRPRFSSPPEVPYPNPRIKDTEHLKDHSAESKKMENCLAESRHEVGKPETSENAEAS
NKIEKYNVPLNRLKMMFERGEPAQTKILRAQSRSTGGRKISENSYSLDDLEIGPGQLSSS
AFNTEKSESRRNLEFPRLSDTSIKDRMAKYQAAVSKQSSSTNYTNELKANGGEIKTHKLE
QKENVPPGPEVCISHQDGEKVSASENSLAACSTPPEDDSCKSQVKSDVQQPVHPKPLSPV
ARASSLSESSPPKAVKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKL
SLGTYASLHGRIYCKPHFNQLFKSKGNYDEGFGHRPHKDLWASKLENEETLERPAQLPNA
AEIPQSPGVEDAPIAKVGVLTASMEAKASSQLEKEDKPAETKKLRIAWPPPTELSSSGSA
LEEGIKVSKPKWPPEDEVSKPEAPEDVDLDLKKLRRSSSLKERSRPFTVAASFRTASVKS
PKPLSPPMRKGWSLSEQSEEFGGGVAAERKQMEKASASEKNGSVGKTTWPSKESRGGEAA
GRSKEVQDFEIGSENLIENGASLDEGDRDLLQQQSPLEPKSKNWSSFADNTSAKEFTTQK
QKSQDVEFWEGEVVEELSVEEQIKRNRYYDEEEDEE
NT seq 2271 nt   +upstreamnt  +downstreamnt
atggaatcaactccgtttaacagacagcaatggacttctctgtcattgagggttacggcc
aaagaactttctcttgtcaacaagaacaaatcatcagctattgtggaaatattctccaag
taccagaaagcagctgaagaagcaaacatggaaaagagaagaagtaacactgaaaatctc
ccccagcactttagaaggggaaacctgaccgtgctgaagaagaagtgggagaacccagcc
cctggagtagagtctctcccagagtccacgcgaaacagcagcgccgaggtcaggcacaga
ggcgaccctcctcctgctgaagtggccagtagctctgcctctggggtcgaagctgaccaa
ggagtctgccccagacctagattctcatcgcctcctgaagtcccgtatccgaacccccgc
atcaaggacactgagcatcttaaagaccactcggcggaaagtaaaaaaatggaaaattgt
ctggcagaatccaggcatgaagtaggaaaacccgaaacgagtgaaaacgccgaagcttcc
aacaaaatagagaaatacaatgttccgctgaacaggctgaagatgatgtttgagagaggt
gaaccagctcaaaccaagattcttcgggcccaaagccgaagcacaggtgggaggaagatc
tctgaaaacagctattctctggatgacttggaaataggcccaggtcagttgtcatcttcg
gcattcaacacggagaaaagcgagagtaggagaaatctggagttccctcgcctgtcagac
acctccataaaggatcgaatggccaagtatcaggcagctgtgtccaaacaaagcagttca
accaactatacaaacgagttaaaagccaatggtggtgaaatcaaaactcataaattggag
caaaaggagaatgtgcccccaggtcctgaggtctgcatctcccatcaggatggagaaaag
gtttctgcatctgagaatagcctggcagcctgttccaccccgcctgaagatgattcctgt
aaatcccaggttaagagtgatgtccagcagcctgtgcatcccaagccactaagtccagtt
gccagagcctccagcctttctgaaagttctcctcccaaagcagtgaagaagtttcaggca
cctgccagagagacctgcgtggaatgtcagaaaacagtctacccgatggagcgtctcttg
gccaaccagcaggtgtttcacatcagctgcttccgttgttcctattgcaacaacaaactc
agtctaggaacatatgcttctttacatgggagaatctattgcaagcctcacttcaatcaa
ctctttaaatctaaaggcaactatgacgaaggctttggacacagaccacacaaggatctg
tgggcaagcaaactggaaaatgaagagacgttggagagaccagcccagcttccaaatgca
gcggagatccctcagagcccgggggtagaagacgcccccattgctaaggtgggtgtgctg
actgcaagtatggaagccaaggcctcctcccagctggagaaagaagacaagccagctgaa
accaagaagctgaggatcgcctggccgcccccgactgagcttagcagttcagggagtgct
ttggaggaaggcatcaaagtttctaagccgaagtggcctcctgaggatgaagtcagcaag
cctgaagctcccgaggatgtagatctggatctgaagaagctaagaagatcttcctcactg
aaggagcgaagccgcccattcactgtagcagcttcatttcgaaccgcttcagtcaagagc
cccaaacccttgtccccacctatgaggaaaggctggagcctgtcagagcagagcgaggag
ttcggaggaggtgtagcagcagaaaggaaacagatggaaaaggccagtgcctccgagaag
aatgggagtgtgggaaaaacgacctggccaagcaaggaatctagaggaggggaggcagcg
gggaggagtaaggaagttcaggattttgagatagggagtgaaaatctgatagaaaatggt
gcaagcttagatgaaggtgacagagacctcctccaacagcagtctcccctagaacccaag
tctaaaaattggtctagctttgcagacaacacctctgctaaagaattcactacccagaag
cagaaatcccaggatgtggagttctgggagggagaagtcgtcgaagagctatccgtggag
gaacagataaagagaaatcggtactacgatgaggaggaagatgaggaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (13)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (11)   
DNA sequence (17)   
   RefSeq(nuc) (11)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (52)   

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