KEGG   Sus scrofa (pig): 100144452
Entry
100144452         CDS       T01009                                 
Symbol
ABCF1
Name
(RefSeq) ATP-binding cassette sub-family F member 1
  KO
K06184  ATP-binding cassette, subfamily F, member 1
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:ssc03012]
    100144452 (ABCF1)
Translation factors [BR:ssc03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    100144452 (ABCF1)
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_29 AAA_14 ABC_tran_Xtn NACHT AAA_16 AAA SMC_N AAA_18 AAA_24 AAA_28 RsgA_GTPase MMR_HSR1 AAA_5 AAA_25 AAA_22 cobW AAA_23 ATP-synt_ab NB-ARC
Other DBs
NCBI-GeneID: 100144452
NCBI-ProteinID: NP_001116541
Ensembl: ENSSSCG00000001346 ENSSSCG00000001370
Vega: OTTSUSG00000001280
UniProt: Q767L0
Position
7:23126255..23144030
AA seq 807 aa
MPKGPKQQPPEPEWIGDGESTSPTDKVVKKGKKDKKTKKTFFEELAVEDRQAGEEEKVLK
EKEQQQQHQQQQQKKKRDTRKGRRKKDVDDDDGEEKELMERLKKLSVPASDEEEEAPAPV
PRGGKKNKGGNVFAALIQDQSEEEEEEEKHPPKPAKPEKNRINKAVSQEQQPGPKGRKGK
EEKSKGKAKPQNKFAALDDEEEQDEEEIKEKEPPKQGKEKAKKAEQMEYERQVASLKAAN
AAENDFSVSQAEMSSRQAMLENASDIKLEKFSISAHGKELFVNADLYIVAGRRYGLVGPN
GKGKTTLLKHIANRALSIPPNIDVLLCEQEVVADETPAVQAVLRADTKRLKLLEEERRLQ
GQLEQGDDTAADRLEKVYEELRATGAAAAEAKARRILAGLGFDPEMQNRPTQKFSGGWRM
RVSLARALFMEPTLLMLDEPTNHLDLNAVIWLNNYLQGWRKTLLIVSHDQGFLDDVCTDI
IHLDAQRLHYYRGNYMTFKKMYQQKQKELLKQYEKQEKKLKELKAGGKSTKQAEKQTKEA
LTRKQQKCRRKNQDEESQEAPELLKRPKEYTVRFTFPDPPPLSPPVLGLHGVTFGYEGQK
PLFKNLDFGIDMDSRICIVGPNGVGKSTLLLLLTGKLTPTRGEMRKNHRLKIGFFNQQYA
EQLRMEETPTEYLQRGFNLPYQDARKCLGRFGLESHAHTIQICKLSGGQKARVVFAELAC
REPDVLILDEPTNNLDIESIDALGEAINEYKGAVIVVSHDARLITETNCQLWVVEEQSVS
QIDGDFDDYKREVLEALGEVMVSRPRE
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgccgaaggggcccaagcagcagccgccggagcccgagtggatcggggacggagaaagc
acgagccctacagacaaagtggtgaagaaagggaagaaggacaagaagaccaaaaagacg
ttctttgaagagctagcagtagaagacagacaggctggggaagaagagaaagtgctcaag
gagaaggagcagcagcagcagcaccagcagcagcagcaaaaaaagaaacgagacactcga
aaaggccggcggaagaaggatgtggatgatgatgatggagaggagaaggagctcatggag
cgtcttaagaagctctcagtgccggccagtgatgaggaggaggaggcacctgccccggtg
ccccgaggagggaagaaaaacaagggtggtaatgtttttgcagctctgattcaggatcag
agtgaggaagaggaggaggaagaaaaacatcctcctaagccagccaagccagagaagaat
cgcatcaataaggctgtatctcaggaacaacaaccagggcccaagggcagaaagggaaag
gaggaaaagtcaaagggcaaggccaagcctcaaaataaatttgctgctctggacgatgaa
gaggagcaggatgaagaggaaataaaagaaaaggagcctcccaagcaagggaaggagaag
gccaagaaggcagagcagatggagtatgagcgccaggtggcttcattaaaagcagccaat
gctgctgaaaatgacttctccgtgtcacaagcagagatgtcttcccgccaggccatgttg
gaaaatgcatctgacatcaagctggagaagttcagcatctcggcccacggcaaggagctc
ttcgtcaacgcagacctgtacattgtcgccggccgccgctacgggctggtgggacccaat
ggcaagggcaagaccacgctcctcaagcacatcgccaaccgagccctgagcatccctccc
aacatcgacgtgctgctgtgcgagcaggaggtggtggctgatgagacgccagctgtgcag
gctgttcttcgagctgacaccaagcggctgaagctgctggaagaggagcggcggctccag
ggacaattggaacagggcgatgacacggccgccgacaggctggagaaggtgtatgaggag
ttgcgggccactggggcggccgctgccgaggccaaagcccgccggatcctggctggtctg
ggcttcgaccctgaaatgcagaatcggcccacacagaagttttcggggggctggcgcatg
cgtgtctccctggccagggcgctgttcatggagcccacgctgctgatgttggatgagccc
accaaccacctggacctgaacgctgtcatctggctcaataactacctccagggctggcgg
aagacgctgctcatcgtctcccacgaccagggcttcctggatgatgtctgtacagatatc
atccatcttgatgcccagcggctccattactacaggggcaattacatgaccttcaagaag
atgtaccagcagaagcagaaggagctcctgaagcagtatgagaagcaagagaaaaagctg
aaggagctgaaggcgggcggcaagtccaccaagcaggcggaaaagcaaaccaaggaagcc
ctgactcgaaagcagcagaagtgccggcggaaaaaccaggatgaggagtcacaggaggcc
cccgagctcctgaagcgccccaaggaatacaccgtgcgcttcacgttccccgacccgccg
ccactcagccctcctgtgctgggcctgcatggtgtgacatttggctacgagggtcagaaa
ccactctttaagaatctggacttcggcatcgacatggactccaggatctgcatcgtgggc
cctaacggcgtcgggaagagcaccctgctgctgctgctgactggcaagctgaccccgact
cgaggcgaaatgaggaagaaccaccggctgaaaattggcttcttcaaccagcagtacgca
gagcagctgcgcatggaggagacgcccactgagtacctgcagcgcggcttcaacctgccc
taccaggatgcccgcaagtgcctgggccgcttcggccttgagagccacgcccacaccatc
cagatctgcaaactctcaggtgggcagaaagcccgagttgtgtttgcagagctggcctgt
cgggagcctgatgtcctcatcttggacgagcccaccaacaacctggacattgagtctatc
gacgccctaggggaggccatcaacgagtacaagggagctgtgatcgtcgtcagccacgat
gcccgactcatcacggaaaccaactgccagctgtgggtggtggaggagcagagcgtcagc
cagatcgacggtgacttcgacgactacaagcgggaggtgttggaggccctgggtgaagtc
atggtcagccggccccgcgagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (2)   
   OC (1)   
   VEGA (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (21)   
   Pfam (21)   
All databases (49)   

Download RDF
DBGET integrated database retrieval system