KEGG   Sus scrofa (pig): 100144499
Entry
100144499         CDS       T01009                                 
Symbol
RAB5A
Name
(RefSeq) ras-related protein Rab-5A
  KO
K07887  Ras-related protein Rab-5A
Organism
ssc  Sus scrofa (pig)
Pathway
ssc04014  Ras signaling pathway
ssc04137  Mitophagy - animal
ssc04144  Endocytosis
ssc04145  Phagosome
ssc04148  Efferocytosis
ssc04962  Vasopressin-regulated water reabsorption
ssc05014  Amyotrophic lateral sclerosis
ssc05022  Pathways of neurodegeneration - multiple diseases
ssc05132  Salmonella infection
ssc05146  Amoebiasis
ssc05152  Tuberculosis
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    100144499 (RAB5A)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100144499 (RAB5A)
   04145 Phagosome
    100144499 (RAB5A)
   04137 Mitophagy - animal
    100144499 (RAB5A)
   04148 Efferocytosis
    100144499 (RAB5A)
 09150 Organismal Systems
  09155 Excretory system
   04962 Vasopressin-regulated water reabsorption
    100144499 (RAB5A)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100144499 (RAB5A)
   05152 Tuberculosis
    100144499 (RAB5A)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    100144499 (RAB5A)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100144499 (RAB5A)
   05022 Pathways of neurodegeneration - multiple diseases
    100144499 (RAB5A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100144499 (RAB5A)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssc04147]
    100144499 (RAB5A)
   04031 GTP-binding proteins [BR:ssc04031]
    100144499 (RAB5A)
Membrane trafficking [BR:ssc04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    100144499 (RAB5A)
 Endosome - Lysosome transport
    100144499 (RAB5A)
Exosome [BR:ssc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100144499 (RAB5A)
  Exosomal proteins of other body fluids (saliva and urine)
   100144499 (RAB5A)
  Exosomal proteins of colorectal cancer cells
   100144499 (RAB5A)
  Exosomal proteins of bladder cancer cells
   100144499 (RAB5A)
GTP-binding proteins [BR:ssc04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    100144499 (RAB5A)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase AAA_16 MCR_beta BrnT_toxin
Other DBs
NCBI-GeneID: 100144499
NCBI-ProteinID: NP_001116652
Ensembl: ENSSSCG00000029497
UniProt: Q06AU6
Position
13:6905302..6940165
AA seq 215 aa
MANRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
QASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKK
LPKNEPQNPGINCTRGRGVDLTEPTQPTRSQCCSN
NT seq 648 nt   +upstreamnt  +downstreamnt
atggctaatcgaggagcaacaagacccaacgggccaaatactggaaataaaatatgccag
tttaaactagtacttctgggagagtctgctgttggcaaatcaagcctagtgcttcgtttt
gtgaagggccaatttcatgaatttcaagagagtaccattggggctgcttttctaactcaa
accgtgtgtcttgatgacacaacagtaaagtttgaaatatgggatacagctggtcaagaa
cgataccatagcctagcaccaatgtactacagaggagcacaagcagccatagttgtatat
gatatcacaaatgaggagtcctttgccagagccaaaaactgggttaaagaacttcagagg
caagccagtcctaacattgtaatagctttatcaggaaacaaggctgacctcgcaaataaa
agagctgtcgatttccaggaagcacagtcctatgcagatgacaacagtttattatttatg
gaaacatcagctaaaacatcaatgaatgtaaatgaaatattcatggcaatagctaaaaag
ttgccaaagaatgaaccacagaatccaggaataaattgtaccagaggaagaggagtagac
cttactgaacccacgcagccaaccaggagtcagtgttgtagtaattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (27)   
   RefSeq(nuc) (3)   
   GenBank (12)   
   EMBL (12)   
Protein domain (10)   
   Pfam (10)   
All databases (74)   

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