KEGG   Sus scrofa (pig): 100144522
Entry
100144522         CDS       T01009                                 
Symbol
NOTCH4
Name
(RefSeq) neurogenic locus notch homolog protein 4 precursor
  KO
K20996  Notch 4
Organism
ssc  Sus scrofa (pig)
Pathway
ssc01522  Endocrine resistance
ssc04330  Notch signaling pathway
ssc04919  Thyroid hormone signaling pathway
ssc05165  Human papillomavirus infection
ssc05200  Pathways in cancer
ssc05206  MicroRNAs in cancer
ssc05224  Breast cancer
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    100144522 (NOTCH4)
 09150 Organismal Systems
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    100144522 (NOTCH4)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100144522 (NOTCH4)
   05206 MicroRNAs in cancer
    100144522 (NOTCH4)
  09162 Cancer: specific types
   05224 Breast cancer
    100144522 (NOTCH4)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    100144522 (NOTCH4)
  09176 Drug resistance: antineoplastic
   01522 Endocrine resistance
    100144522 (NOTCH4)
SSDB
Motif
Pfam: EGF hEGF Ank EGF_CA Ank_2 Notch Ank_4 Ank_5 Ank_3 EGF_3 NODP EGF_2 NOD EGF_MSP1_1 DL-JAG_EGF-like
Other DBs
NCBI-GeneID: 100144522
NCBI-ProteinID: NP_001116619
Ensembl: ENSSSCG00000001440
Vega: OTTSUSG00000001359
UniProt: A5A8X3
Position
7:complement(24231293..24256281)
AA seq 1994 aa
MRPPSLLLPPLLLLLCRPVVQSRGLQCGSFPGPCANGGTCLSPPQGQGTCQCAPGFLGET
CQFPDPCQDAQLCQNGGSCQALLPTLPGSTSPPSPLTPSFFCTCPFGFTGERCQAQVKDP
CSSFCSKMGRCHIEASGRPRCTCMPGWTGEQCQHRDFCSANPCVNGGVCLATYPQIQCHC
PPGFEGHTCEHDVNECFLNPGPCPKGTSCYNTLGSFQCLCPVGRDGPRCELQPGPCPPRG
CLNGGTCQLVPGRDSTFHLCLCPPGFTGASCEVNPDDCVGHQCQNGGICQDGLGTHTCLC
PEAWTGWDCSEDVDECEAQGVPRCRNGGTCQNSAGSFHCVCVSGWGGTDCEENLDDCAAA
TCAPGSTCIDRVGSFSCLCPPGRTGLLCHMEDMCLSQPCHGEAQCSTNPLTGSTLCLCQP
GYTGPTCHQDLDECQMAQQGPSPCEHGGSCLNTPGSFECLCPPGYTGSRCEADHNECLSQ
PCHPGSTCLDLLATFHCLCPPGLEGRLCEVETDECASAPCLNQADCHDLPNGFRCVCQPG
FTGPRCEEDINECRSSPCANGGQCQDQPGSFHCECLPGFEGPRCQTEVDECLSSPCPSGA
SCLDLPGAFLCLCPSGFTGHLCESPLCAPNLCQSKQKCQDQEDKAHCLCPDGSPGCAPAE
DNCTCHHGHCQRSSCVCDVGWTGPECDAELGGCISTPCAHGGTCHPQPFGYNCTCPTGYT
GPTCREEVTACHSAPCLNGGSCSPSPGGYSCTCPPSHTGLHCQTSIDHCASAPCLNGGTC
VNRPGAPSCLCAPGFQGPRCEGRVRPSCADSPCRNRATCQDGPQGPRCLCPPGYTGGSCQ
TLMDFCAQKPCPRNSRCLQTGPSYQCLCLQGWTGPLCNLPLSSCQKAALSQGAEVSSLCQ
NGGICVDNGPSYFCHCSPGFQGSMCQDRVHPCESRPCQHGATCVAQPNGYLCQCAPGYSG
QNCSEEPDACQSQPCHNHGTCTPKPGGFHCACPPGFVGLRCEGDVDECLDRPCHPTGTAA
CHSLANAFYCQCLPGHTGQWCEVEIDPCQSQPCSHGGSCETTAGPPPGYTCHCPQGFEGP
TCSHRAPSCGLHHCHHGGLCLPSPKPGFPPRCACLNGYGGPDCLTPPTPPGCGPPSPCLH
NGSCSETPGLGGPGFRCSCPPSSPGPRCQRPGAKGCEGRGGDGACDAGCSGPGGNWDGGD
CSLGVPDPWKGCPSHSRCWLLFRDGQCHPQCDSEECLFDGYDCETPPTCTPAYDQYCRDH
FHNGHCEKGCNTAECGWDGGDCRPEDGGSEWGPSLALLVVLSPATLDQQLLALARALSLT
LRVGLWVRKDSDGRDMVYPYPGAQAEEELGGTPDPSHQERAAPQTQPVGKETDSLSTGFV
VVMGVDLSRCGPDHPASRCPWDPGLLLRFLAAMAAVGALEPLLPGPLLAAHPRAGTAPPA
NQLPWPVLCSPVAGVLLLALGALLVLQLIRRRRREHGALWLPPGFTRKPRSQAVPRRRRP
PLGEDSIGLKALKPEAEVDEDGVVMCSGPEEGEEVGQAEEMASPSKCQLWPLSADCQELP
QAAMLTPPQDSEVDIPDVDTRGPDGVTPLMSAVCCGGVESRTYQETWLGSPEPWEPLLGG
GACPQVHTVGTGETPLHLAARFSRPTAARRLLEAGANPNQPDRAGRTPLHTAVAADAREV
CQLLLRSRQTAVDARTEDGTTALMLAARLAVEDLVEELIAARADVGARDKWGKTALHWAA
AVNNSRAARSLLQAGADKDAQDGREQTPLFLAAREGAVEVAQLLLGQGAARGLRDQAGLT
PGDIARQRNHWDLLTLLEGAGPPEARHKATPGRGVGTFQRARTASGSVLPRGGGALPRCR
TLSAGACPQARTLSVDLAAHGGGAYSHGRSLSKGGAGGGPPLRGRRFSAGMRGPRPHPAI
VRGRSGVTAGSGGVASGDHWPCDWVALDSCGPASSTPIPPPCLTPSPERASPQVAWGPPA
HQVIPLNAGGEGQK
NT seq 5985 nt   +upstreamnt  +downstreamnt
atgcggcccccttcactgctgctgcctccgctgctgctcctgctgtgtcggcctgtcgtc
cagtctagagggctgcagtgtgggagtttcccaggaccctgtgccaacggaggcacctgc
ctgagcccacctcaggggcaagggacctgccagtgtgcccctggcttcctgggagagacg
tgccagtttcctgacccctgccaggatgcccagctctgccagaacgggggcagctgccaa
gccctgcttcccacccttcctggctccaccagccctccctctcccttgacccccagcttc
ttctgcacctgcccctttggcttcactggcgagaggtgccaggcccaggtcaaggacccc
tgctcttccttctgttccaaaatgggccgctgccacatcgaggcctcgggccgcccccgg
tgcacctgcatgccggggtggacaggtgagcagtgccagcatcgggacttctgctcagcc
aacccctgcgtcaatggaggggtgtgtctggccacataccctcagatccagtgccactgc
ccacccggcttcgagggccacacctgcgaacatgatgtcaacgaatgtttcctgaacccg
ggaccctgccccaagggcacctcctgctataacactctggggtccttccagtgtctctgc
cccgtggggcgggacggtccccgctgtgagctccagccaggaccctgcccccccaggggc
tgtctcaatggaggcacctgccagctggttccagggagagattccaccttccacctctgc
ctgtgtcccccaggtttcacaggcgcaagctgtgaggtgaacccagacgactgtgtcggg
caccagtgtcagaacgggggcatctgccaggatgggctgggcacccacacctgcctctgc
ccagaggcctggacaggctgggattgctctgaagatgtggatgaatgtgaggctcagggt
gtccctcgctgcagaaacggggggacctgccagaactcagcgggcagcttccactgcgtg
tgtgtgagcggttggggaggcaccgactgcgaggagaacctggacgactgcgctgctgcc
acctgtgcgccaggatccacctgcattgaccgcgtgggctccttctcttgcctctgcccc
cctggccgcacaggcctcctgtgccacatggaggacatgtgtctgagccagccgtgccat
ggggaagcccagtgcagcaccaaccccctgacgggctccaccctctgcctgtgtcagcct
ggctacacggggcccacctgccaccaggacctggacgagtgtcagatggcccagcaaggc
cccagtccctgtgaacatggaggctcctgcctcaacacgcctggctcctttgagtgcctc
tgtccccctggctacacgggatcccgctgcgaggccgaccacaatgagtgcctgtcccag
ccctgccaccccggcagcacctgcctggacttgctcgccaccttccactgcctctgccca
ccaggcttagaggggcggctctgtgaggtggagaccgatgagtgtgcctccgccccttgc
ctgaaccaggctgactgccacgacctgcccaacggctttcggtgtgtctgccagcctgga
ttcaccggcccccgatgtgaggaggacatcaatgagtgcagaagctctccctgtgccaac
ggtgggcagtgccaggaccagcctggatccttccactgcgagtgtctcccaggctttgaa
ggcccacgctgtcagactgaggtggacgagtgtctgagtagcccgtgcccctctggagcc
agctgccttgatctcccaggagctttcctttgcctctgcccctctggcttcacaggtcat
ctctgtgaatctcccctgtgtgctcccaacctgtgccagtccaagcaaaaatgccaggat
caggaggacaaggcccactgcctctgccccgatggaagccctggctgtgcccctgctgaa
gacaactgcacctgccatcatggacactgtcagagatcctcatgtgtgtgtgatgtgggt
tggacaggaccagagtgtgacgcagagctgggcggctgcatctccacaccctgtgcccat
ggggggacctgccacccccagccctttggctacaattgcacctgccccacaggctacaca
gggcccacttgcagggaggaggtaacagcttgtcactcagcaccctgtctcaatggtggc
tcctgtagccccagccctgggggctactcctgcacctgccctccgagccacaccgggctc
cactgccagaccagcattgaccactgtgcctctgcaccgtgcctcaatgggggcacctgt
gtgaacaggcccggcgccccctcctgcctctgcgccccaggcttccagggcccacgctgt
gagggaagggtccgtcccagctgcgcagacagcccctgcaggaacagggccacctgccaa
gacggccctcagggtccccgctgcctctgcccacccggctacacaggaggcagctgccag
acgctgatggacttctgtgcccagaagccctgtccacgcaattcccgctgcctccagaca
gggccctcctaccaatgcctgtgcctccagggatggactgggcctctctgcaaccttccg
ctgtcctcctgccagaaggcggctctgagccaaggcgcagaagtctcttccctgtgccag
aacggaggcatctgcgttgacaacggcccctcctatttctgccactgttcccctgggttc
caaggcagcatgtgccaggacagggtgcacccgtgtgagtccaggccctgccagcatgga
gccacctgcgtggcccaacccaacggttacctctgccagtgtgcaccaggctacagtgga
cagaactgctcagaggaacctgatgcttgtcagtcccagccctgtcacaaccatggaacc
tgcacccccaaacctggaggcttccactgtgcctgtcctccgggctttgtggggctgcgc
tgtgagggggacgtggatgagtgtctggaccggccctgtcaccccacaggcactgcagcc
tgccactctctggccaatgccttctactgccagtgtctgcctggacacacaggccagtgg
tgtgaagtggagatagacccctgccagagccagccctgctcccacggagggtcttgtgag
accacagcgggaccacccccaggatacacctgccactgcccccagggttttgaaggcccc
acctgcagccacagagccccctcctgcggcctccaccactgccaccacggaggcctttgt
ctgccctcccccaagcctggattcccaccacgctgtgcctgcctcaatggctatgggggc
cctgactgcctgaccccacccacccctcctggctgcggccctccttctccatgcctacac
aatggcagctgctcagagacccctgggctggggggtcctggctttcgatgctcctgcccg
cccagctccccagggccccggtgtcagaggcccggagcaaagggatgtgagggcagaggt
ggagatggggcctgtgatgctggctgcagcggcccaggaggaaattgggatggaggggac
tgctccctgggggtcccggacccctggaagggctgtccctcccactcccggtgctggctt
ctcttccgggatgggcagtgtcaccctcagtgtgactctgaagagtgtctgtttgatggc
tatgactgcgagactcctccaacctgcactccagcctatgaccagtactgccgagatcac
ttccacaatggacactgcgagaagggctgcaacaccgcagaatgtggctgggatgggggt
gactgcaggcccgaagatgggggttcagaatgggggccgtccctggccctgctggtggtg
ttgagccccgcaaccctggaccagcagctgcttgccctggcccgggcgctgtccctgact
ctgagggtagggctctgggtgaggaaggacagtgatggcagggacatggtgtacccctat
cctggagcccaggctgaagaggagctaggagggaccccagacccctctcatcaggagaga
gcagccccacagacacagcctgtgggcaaggagacagactccctcagcaccgggtttgtc
gtggtgatgggtgtggatttgtcccgctgtggccctgaccaccctgcatcccgctgtccc
tgggaccctgggctcctgctccgcttcctggctgccatggcggcagtgggggccctggag
cccctcctgccaggacccctgctggctgcccaccctcgtgcaggtaccgcgccccctgcc
aaccagctcccctggcctgtactgtgctcgccggtggccggggtgcttctcctggccctc
ggagctcttctcgtcctccagctcatccgccgacggcgccgagagcatggggccctctgg
ctgccccccggcttcacccgaaagcctcggtctcaggcagttccccgccgtcgccggccc
cccctgggagaggacagcatcggcctcaaggcactgaaaccagaggcagaagttgatgag
gacggagttgtgatgtgctcgggccccgaggaaggagaggaggtgggccaggctgaagaa
atggcctcaccctccaagtgccagctctggcctctgagtgccgactgtcaggagctcccc
caggcagccatgctgactcctccccaggattcggaggtggatatccctgatgtggacacc
cgtggacctgatggagtgacacccctgatgtcagcagtctgctgtgggggagtggagtcc
aggacctatcaggagacatggttgggaagccctgagccctgggaacctctgctgggtggc
ggggcttgtccccaggttcacaccgtgggcactggggagacccccctgcacctggctgcc
cgattctcccggccaaccgctgcccgccgccttcttgaagcgggagccaaccccaaccag
ccagatcgggcagggcgcaccccccttcacactgctgtggctgctgatgctcgcgaggtt
tgccagctcttactccgaagcagacagactgccgtggatgcacggacagaggatgggacc
acagccctgatgttggccgccaggctggctgttgaagacctggttgaagaactgattgca
gcccgagcagatgtgggagccagggataaatggggaaaaaccgcgttgcactgggccgcc
gccgtgaacaactcccgggccgcccgttcccttctccaggccggagccgataaagacgca
caggacggcagggagcagacgccgctgttcctggctgcccgagaaggggcggtggaggtg
gcccagctattgctggggcagggagccgcccgagggctgcgggaccaggccgggctaaca
ccgggagacatcgcccgccagcgaaaccactgggatctgctgactctgctggaaggggcg
gggccaccggaggcgcgtcacaaagccacgccgggccgcggggtcggaaccttccagcgc
gcgcggacggcgtcgggaagtgtgctcccgcgtgggggcggggctctgccgcgctgccgg
acgctgtcagccggagcctgtccgcaagcccggactttgtccgtagacttggccgcgcat
gggggcggggcctattcgcacggccgaagcctatcgaaaggaggagcaggaggaggcccg
cccctccgcggccgtaggttttctgcaggcatgcgcgggccccgaccccacccagcaata
gtgcgaggaagatccggggtcacggccgggagcgggggtgtggcctcaggcgatcactgg
ccctgcgattgggtggccttagactcctgcggccccgcctccagcactccaatcccgcct
ccttgcctcactccgtccccggagcgggcatcccctcaagttgcctggggtcccccagcc
caccaagtaatacccttaaatgcgggaggcgagggtcaaaaatga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (175)   
   KEGG ORTHOLOGY (1)   
   RefGene (169)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (15)   
   Pfam (15)   
All databases (206)   

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