KEGG   Sus scrofa (pig): 100151740
Entry
100151740         CDS       T01009                                 
Symbol
FYCO1
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1
  KO
K21954  FYVE and coiled-coil domain-containing protein 1
Organism
ssc  Sus scrofa (pig)
Pathway
ssc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100151740 (FYCO1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100151740 (FYCO1)
Membrane trafficking [BR:ssc04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    100151740 (FYCO1)
SSDB
Motif
Pfam: FYVE RUN SSFA2_C
Other DBs
NCBI-GeneID: 100151740
NCBI-ProteinID: NP_001121949
Ensembl: ENSSSCG00000011317
UniProt: Q6YT43 A0A8D1YBG4
Position
13:complement(29068107..29146792)
AA seq 1444 aa
MSASKLASDKLRSTLLGAALKPWQGSLPVHGLLQCRAPGLQAFKAAATTVSLNHFSSCPR
SASNSGLNSHEAHSQERRPRPVTVTMASSSVESQLQRIIRDLQDAVTELSREFKDAGEPI
TDDSTSLHKFSYKLEYLLQFDQKEKATLLGNKKDYWDYFCACLAKVKGANDGIRFVKSIS
ELRTSLGKGRAFIRYSLVHQRLADTLQQCFMNTKVTSDWYYARSPFLKPKLSSDIVGQLY
ELTDVQFDLASRGYDLDAAWPTFARRTLGPGSAAYMWRPPSRSSSMSSLVSSYLQTPEMA
SSLDLSNPLNHEALEGFDEMRLELDQLEVREKQLQERMQQLDRENQELRVTVSLQGEQLQ
GERERGRAATEDNVRLTGMVATLQKQWEIAQATQNTVKELQACLQALELGASEKEEDYRS
ALQRLESMLQPLVQELEATHSSLGRKDLHSADVPDQLDMAEQKADMALDTQRQQECVPSD
SALGIQELGAKLQALERENTQIEELNRQQSAQLEQLAKELQLKEEARASLEHQVEEMALL
REEPSGKGQEAAQLRHQLQESLAHLSSLKEELAEVKREEGQRREEKELLEQEARSLMRQL
QLLETQLAQVSQHVSDLEEQKKQLIQDKDHLSQKVGTLEQLAGQPAPDLPVVGEERKALS
STLQPACEKLEEEQQRGPWEGQTDDPTMLGGGQEEKLQQANRELEKELQNVLERNQLLEG
KLQALQADYHALQQREAAIQGSLASLESEQASIRHMGDQMEASLLAVKKAKETMRAQVAE
KEVALQCKEAECRQLREQAEQCRQLAEAREGELRALEGQCRQQTQLIETLTADKGQQGLG
PPQDQASQELAAQLALTKAQLEIHQGEAQRLQAGMVDLQAKLQAALGDQEKLQSQLNVTE
TALREHKALVQQLKEQNEALNRAHVQELLQCSELEGVLQAKRAGEAQKREEELRALQEEL
SQAKCTSEEAQLEHAELQEQLHRANMDTAELGIQVCALTAEKERVEGALARAIQELRDAK
EAASKEQEALAHQVAGLQQEKESLQEKLKAAEDAASSLSGLQTQVAQAEQQAQSLRESAR
QELDTLKFQLSTEIMDYQNRLKDLGAMSEWDAPPAVWHTSSEECRSLRGQLEERSQQLQA
AEKAVEKLKATQTDMGEKLSCTNKQLAECQAALLEKEEEGAALRQDLDRTQKELEKATTK
IQKYYDRLCQEATDREKNDQKMLADLDDLNRTKKYLEERLIELLKDKDALWQKSDALEFQ
QKLSAEERWLGDTEANHCLDCKREFSWMVRRHHCRICGRIFCYYCCNNYVLSKHSGKKER
CCRACFHKLSGGPGSPDSTSSGTSQGESSPTPSSAQAPGGQGANTDCRLPNDAVFDIITD
EELCQIQESGSSLPETPTEVDSLDPNVAEQADTDVCPAPPGRDGTGRGPRIQALRGTWKD
ATDS
NT seq 4335 nt   +upstreamnt  +downstreamnt
atgtcggcttccaagctggcctctgacaagctccggagcactctcctaggtgctgcattg
aagccctggcagggcagcctgcctgtccacggactgcttcagtgccgagcccctggactc
caggccttcaaagctgcagccaccactgtgtccttaaatcacttcagcagctgcccacgt
agcgctagtaactcaggacttaacagccatgaggcacacagccaggaaaggcggccccgg
ccggtcacggtcaccatggcgtccagcagtgtggagagccagctgcagagaatcatccgc
gatctgcaagatgctgtgacagaactaagcagagaatttaaagatgcaggggaacccatc
acagatgacagcaccagcttgcataagttctcttataaacttgagtatctccttcaattc
gatcagaaggagaaggccaccctcctgggcaacaagaaggactactgggattacttctgt
gcttgcctggccaaggtgaagggagccaatgacgggatccgattcgtcaagtctatttca
gagctccgaacatctctgggaaaaggaagagcatttattcgctactccttggtgcaccag
aggttggcagacaccttacagcagtgcttcatgaacaccaaagtgaccagtgactggtac
tacgcaaggagcccctttctgaagccaaagctgagctctgacatcgtgggccaactctat
gagctgaccgacgtccagtttgacctggcatcaaggggctacgacctggacgctgcctgg
ccaacttttgccaggaggacactgggtcctggctctgctgcttacatgtggagacccccc
agccgaagctccagcatgagcagtttggtgagcagctacctgcagactccggagatggcc
tccagccttgacctgagcaaccccttaaaccacgaggcactggaaggctttgatgagatg
cggctggagctggaccagttggaggtgcgggagaagcagctgcaggagcggatgcagcag
ctggacagagagaaccaggagctgcgggtgactgtcagcctgcagggagagcagctgcaa
ggggagagggagaggggccgtgccgccaccgaggacaatgtccgcctcaccggcatggtg
gccacgcttcagaagcagtgggagatagcccaagccacacagaacactgtgaaggagctg
caggcatgcctgcaggccctggagctgggtgcctccgagaaggaggaggactatcgctca
gccctgcagcggctagaatccatgctgcagcccctggttcaggagctggaggcgacacac
agctccctgggcaggaaggacctgcactcagctgatgtcccagaccagctggacatggct
gagcagaaggcagatatggcgctggatacacagaggcagcaagagtgtgtcccctctgac
tcagccctggggatccaggagctgggagcaaagctgcaagccctggaaagggagaacacc
cagatcgaggagctcaacaggcagcagagcgcccagctggagcagctggccaaggagctg
cagctgaaggaggaggcccgggccagcctggagcaccaggtggaggagatggccttgctc
cgggaagaaccatctgggaagggccaggaggctgcccagcttcggcatcagctgcaggag
tcgctggcgcacttgagctccctgaaggaagagctggcagaggtgaaacgggaggagggg
cagcggcgggaggagaaggagcttttggaacaggaggccagatccctgatgcggcagcta
cagctcctagagactcagctggcacaggtgagccagcacgtgagtgacctggaggagcag
aagaagcagctcatccaggacaaagaccacctcagccagaaggtggggaccctggagcaa
cttgctgggcagccagccccagatctgcccgtggtgggggaggagcgcaaggctctgagc
tccaccctgcagccagcctgtgagaagctggaggaggagcagcagaggggcccatgggag
ggacagacagatgatcccacgatgctggggggcggccaggaggagaagctccaacaggcc
aacagggagctagagaaggagctgcagaatgtacttgagcgcaaccagctgttggagggt
aagcttcaggctctgcaggctgattaccatgcactgcagcagcgggaggcagctatccag
ggctccctggcctctctggagtcagagcaggccagcatccggcacatgggcgaccagatg
gaggcgagcctcctggctgtcaagaaggccaaggagactatgagggcccaggtggcagag
aaggaggtggccctgcagtgcaaggaggccgagtgccggcagctgcgggagcaggcagag
cagtgccggcagctagcggaggcccgggaaggggagctcagagctcttgagggccagtgc
cgccagcagacccagctgattgagaccctcacagcagacaaaggccagcaggggcttggc
ccacctcaagaccaggcatcccaggagctagcagcccagctggccctgactaaggcacag
ctggagatccatcagggggaggcccagcgactacaggctgggatggtggatctccaggcc
aagctgcaggcagccctgggtgaccaggagaagttgcagagtcagctgaacgtgaccgag
actgctctgagggaacacaaggccctcgtgcagcaactgaaggagcagaatgaagccctc
aacagggcacatgtccaggaactgctgcagtgctccgagctggaaggggtgctacaggcg
aaaagggcaggtgaggcccagaagagggaggaggagctccgagccctgcaggaggagctg
tcccaggcaaagtgcacctccgaggaggcccagctggaacacgcagagctgcaggagcag
cttcaccgggccaatatggatacggctgagcttggcattcaggtctgtgcactgactgca
gagaaagagcgggtggagggggcactggcccgcgccatccaggagctccgggatgccaaa
gaggcagcctccaaggagcaggaggccctggcacaccaagtcgcagggctgcagcaggag
aaggagagcctgcaggagaagctgaaggcagccgaggacgcagccagctcactgtctggt
ctgcagacccaggtggcccaggcggagcagcaggcccagagcctccgggagtctgcacgc
caggagctcgacaccctcaagttccagctgagcactgagatcatggactaccagaacaga
cttaaggacctgggagccatgagtgaatgggatgcacctccagccgtgtggcatacctcc
agtgaagagtgcaggagcctcagaggccagctggaggagcgaagccagcagctgcaggct
gccgagaaggctgtggaaaagctgaaggctacccagacagacatgggagagaagctgagc
tgtaccaacaagcaacttgcagaatgccaggctgccctgctggagaaggaagaggagggg
gctgccctgcgccaagacctggacaggacccagaaggaacttgaaaaagccacaacaaag
atccagaaatattacgacagactctgccaggaagccacagaccgggagaagaatgaccag
aagatgctcgcagacctggatgacctgaatagaaccaagaagtacctggaggaacggctg
attgagttgctgaaggacaaggatgctctctggcagaagtcagatgccctggaattccaa
cagaagctcagtgctgaggagagatggcttggggatacagaggcgaaccattgcctcgac
tgcaaacgggagttcagctggatggtgcggcggcaccactgcagaatatgtggccgtatc
ttctgttactactgctgcaacaactacgtcctgagcaagcacagcggcaagaaagagcgc
tgctgccgggcctgcttccacaagctgagtgggggtcccgggtcacctgacagcaccagc
tctggcaccagccagggagagtccagccccaccccttcatcagcccaggctcccggaggc
caaggggcgaacacagactgcaggctgcccaacgacgccgtgtttgatatcatcacggat
gaggagttgtgccagatacaggagtccggctcctccttgcctgaaacacctaccgaagtg
gattctcttgacccaaacgtggccgaacaggctgacacagatgtgtgccctgcccctcct
ggccgtgatgggacaggaagaggtcccagaatccaggctctcaggggcacctggaaggat
gccacagattcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (62)   
   KEGG ORTHOLOGY (1)   
   RefGene (57)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (9)   
   UniProt (2)   
   RefSeq(pep) (7)   
DNA sequence (18)   
   RefSeq(nuc) (8)   
   GenBank (5)   
   EMBL (5)   
Protein domain (3)   
   Pfam (3)   
All databases (96)   

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