KEGG   Sus scrofa (pig): 100152361
Entry
100152361         CDS       T01009                                 
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X2
  KO
K06675  structural maintenance of chromosome 4
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssc03036]
    100152361 (SMC4)
Chromosome and associated proteins [BR:ssc03036]
 Eukaryotic type
  Chromosome condensation proteins
   Condensin I
    100152361 (SMC4)
   Condensin II
    100152361 (SMC4)
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_21 AAA_15 AAA_29 Crescentin ABC_tran ATG17_like
Other DBs
NCBI-GeneID: 100152361
NCBI-ProteinID: XP_005670009
Ensembl: ENSSSCG00000011731
UniProt: A0A8D1A0H0 A0A4X1VG91
Position
13:100078149..100120907
AA seq 1288 aa
MPRKGTQPSTARRREEGPPQSPDRTSSDAQPESPPGCSESRAPATAETPSEEIDNRSLEE
ILSSIPPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKS
NVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGNDYEVVPN
SNFYVSRTAYRDNTSVYHISGKKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP
KGQTEHDEGMLEYLEDIIGSGRLNEPIKVLCRRVEILNEHRGEKLNRVKMVEKEKDALEG
EKNIAIEFLTLENEIFRKKNHVCQYYIYDLQKRIAEMETQKEKIHEDTKEINEKSNILSN
EMKAKNKAVKDVEKKLNKITKFIEENKEKFTKLDLEDVQVREKLKHATSKAKKLEKQLQK
DKEKVEEFKSIPAKSENIITETTTRNNALEKEKEKEEKKLKEVMDSLKQETQGLQKEKES
QEKELMGFSKSVNEARSKMDVAQSELDIYLSRYNTAVSQLSKAKDALMAASETLKERKAA
IGDIEAKLPQTECELKEKEKELQKLTQEEINFKSLVRDLFQKVEEAKSSLAMNRSRGKVL
DAIIQEKKTGRIPGIYGRLGDLGAIDEKYDVAISSCCHALDYIVVDSIDTAQECVNFLKR
QNIGVATFIGLDKMAVWAKKMTQIQTPENTPRLFDLVKVKDEKIRQAFYFALRDTLVADN
LDQATRVAYQKDRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMGSSVVVEISEEEVNKME
SQLQRDSQKAVQIQEHKVQLEETVVKLRHSEREMRNTLEKFTASIQRLSEQEEYLRVQVK
ELEANVLATAPDQKKQKLLEENVNAFKAEYDSVAEKAGKVEAEVKRLHNIIVEINNHKLK
AQQDKLDKINKQLDECASAITKAQVAIKTADRNLKKAQDSVFRTEKEIKDTEKEVDDLTT
ELKSLEDKAAEVIKNTNAAEESLPEIQKEHRSLLQELKVIQENEHALQKDALSIKLKLEQ
IDGHIGEHNSKIKYWQKEISKISLHPIEDNPVEEIAVLTPEDLEAIKNPDSITNQIALLE
AQCHEMKPNLGAIVEYKKKEELYLQRVAELDKITYERDNFRQAYEDLRKQRLNEFMAGFY
IITNKLKENYQMLTLGGDAELELVDSLDPFAEGIMFSVRPPKKSWKKIFNLSGGEKTLSS
LALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISD
RLIGIYKTYNITKSVAVNPKEIASKGLC
NT seq 3867 nt   +upstreamnt  +downstreamnt
atgccccgtaagggcacccagccctccactgcccggcgcagagaggaagggccgccgcag
tccccggaccgcaccagcagcgatgcgcagccggagtcgccgcccggctgctcggagagc
cgggcgcctgccaccgcagagactccaagtgaggaaattgataatagaagtttagaagag
attttgagtagcatccctccgccgccgcctccagcaatgaccaatgaagctggagctcct
cggcttatgataactcatattgtaaaccagaacttcaaatcctatgctggggaaaaaatt
ctaggaccttttcataagcgcttttcctgtattattggtccaaatggcagtggcaaatcc
aatgttattgattcaatgctttttgtgtttggctatagagcacaaaaaatcagatctaaa
aaactctcagtactaatacacaattctgatgaacacaaggatattcagagttgtactgta
gaagttcattttcaaaagataattgataaggaagggaatgattatgaagttgttcctaac
agtaacttctatgtatccagaacagcctatagagataatacttctgtttatcacataagt
gggaagaagaagacatttaaggatgttggaaatcttcttcgaagccatggaattgacttg
gaccataatagatttttaatcttgcagggtgaagttgagcagattgctatgatgaaacca
aaaggccagactgaacatgatgagggtatgcttgaatatttagaagatataattggttct
ggacgactaaatgaacctattaaagtcttgtgtcggagagttgaaatattaaatgaacac
agaggagagaagttaaacagagtcaagatggtagaaaaggaaaaggatgccttagaagga
gaaaaaaacatagccattgaatttcttaccttggaaaatgaaatatttagaaaaaagaat
catgtgtgtcagtattatatttatgatctgcagaaacgaattgctgaaatggaaactcaa
aaggaaaaaattcatgaagataccaaagaaattaatgaaaagagcaatatactctcaaat
gaaatgaaagctaagaataaagctgtaaaagatgtagagaagaaactgaataaaatcaca
aaatttattgaggagaacaaagaaaaatttacaaagctagacttggaagatgttcaagtt
agggaaaaactaaaacatgctacaagtaaagccaaaaaactggagaaacaacttcaaaaa
gataaagaaaaggttgaagaatttaaaagtatacctgcaaagagtgagaatatcataact
gagacaacaactaggaacaatgcccttgagaaggaaaaagaaaaagaagagaaaaaatta
aaggaagttatggatagccttaaacaggaaacacaaggacttcagaaagaaaaagaaagt
caagagaaagaacttatgggattcagcaaatcagtaaatgaagcacgttcaaagatggat
gtagcccaatcagaacttgatatctatcttagtcgttataacactgcagtatctcaatta
agtaaagccaaggatgctctgatggcagcttctgagactctcaaagaaaggaaagctgca
attggagatatagaggcaaaactccctcaaaccgagtgtgaactaaaagagaaagagaaa
gaacttcagaaacttacacaggaagaaattaatttcaaaagtttggttcgtgatcttttc
caaaaagttgaagaagcaaagagttccttagcaatgaatcgaagtagggggaaagtcctt
gatgcaataattcaagaaaaaaaaactggcaggattccaggaatatatggaagattgggg
gacttaggagcaattgatgaaaaatatgatgttgccatttcatcctgttgtcatgcatta
gactacattgttgttgattctattgatacagcccaagaatgtgtaaacttcctaaaaaga
caaaatattggagttgcaacctttataggtttggataagatggcagtgtgggcaaagaaa
atgacccaaattcaaactcctgaaaatacacctcgtctatttgatttagtaaaagtgaaa
gatgagaaaattcgccaagctttttactttgctttacgggataccttagtagctgacaac
ttagatcaagccacaagagtagcatatcaaaaagatagaagatggagagtggtaacatta
caggggcagatcatagaacagtcaggtacaatgactggtggtggaagcaaagttatgaaa
ggaaggatgggttcatcagttgttgttgaaatctcagaagaagaggtaaataaaatggaa
tcacagttacagagagactctcaaaaagcagtgcaaatccaggaacacaaagtacaactg
gaagaaacagtagttaagttaaggcatagtgaacgagaaatgaggaatacactagaaaag
tttactgcaagcatccagcgtttatcagagcaagaagaatatttgcgtgtccaagttaag
gaactcgaagctaatgtacttgctacagccccagaccaaaaaaagcagaaattgctggaa
gaaaatgttaatgctttcaaagcagaatatgacagtgtggctgagaaagctggtaaagtt
gaagctgaggttaagaggttacacaacatcattgtagaaatcaataaccataaactcaag
gcccaacaagacaaacttgataaaataaataagcagttagatgaatgtgcttctgctatt
actaaagcccaagtagcaatcaagactgctgacagaaatctcaaaaaagcacaagactct
gtctttcgcacagagaaagaaataaaagatactgagaaagaagtagatgacttaacgaca
gagctaaaaagtcttgaggacaaagcagcagaagtcataaagaatacaaatgctgcagag
gagtccttacccgagatccagaaagaacatcgtagcctacttcaagaattaaaagtaatt
caagaaaatgaacatgctcttcaaaaagatgcacttagtattaagttgaaacttgaacaa
atagatggtcacattggtgaacataattctaaaataaaatattggcaaaaagagatttca
aaaatatcattgcatcccatagaagataatcctgttgaagagattgcagttctaactcca
gaggatcttgaagcaatcaagaacccagattctataacaaatcaaattgcacttttggaa
gcccagtgtcatgaaatgaaaccaaaccttggtgccattgtagagtataaaaagaaggaa
gagttatatttacaacgggtagcagaattggacaaaattacttatgaaagagataatttt
agacaggcgtatgaagatcttcggaaacaaaggcttaatgaattcatggcaggtttttat
ataataacaaataaattaaaggaaaattaccagatgcttactttgggaggcgatgctgaa
ctggagcttgtagacagcttggatccttttgctgaaggaatcatgttcagtgttcgacca
cctaaaaaaagttggaagaagatcttcaacctttcaggaggagaaaaaacgcttagttca
ttggctttagtatttgctcttcaccactacaaacccactcccctgtacttcatggatgag
attgatgcagcccttgatttcaaaaatgtgtccattgttgcattttatatatatgaacaa
acaaaaaatgcccagttcataataatttcccttcgaaataatatgtttgaaatttcggat
agacttattggaatttacaagacatacaatataacaaaaagtgttgcagtaaacccaaaa
gaaattgcatctaaaggactttgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (11)   
   RefSeq(nuc) (5)   
   GenBank (3)   
   EMBL (3)   
Protein domain (8)   
   Pfam (8)   
All databases (51)   

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