KEGG   Sus scrofa (pig): 100152421
Entry
100152421         CDS       T01009                                 
Symbol
EXOSC3
Name
(RefSeq) exosome complex component RRP40
  KO
K03681  exosome complex component RRP40
Organism
ssc  Sus scrofa (pig)
Pathway
ssc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100152421 (EXOSC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssc03019]
    100152421 (EXOSC3)
Messenger RNA biogenesis [BR:ssc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     100152421 (EXOSC3)
SSDB
Motif
Pfam: RRP40_S1 RRP40_N_mamm KH_6 RRP4_S1 Rrp40_N
Other DBs
NCBI-GeneID: 100152421
NCBI-ProteinID: XP_001929041
Ensembl: ENSSSCG00000005355
UniProt: A0A8D0TA53 F1ST67
Position
1:complement(238536341..238541756)
AA seq 275 aa
MAEPAAHAAESFAGCRARAARTVLDQVVLPGEELLLPEQEDGEGPGGAGERPLRLNAGAR
PRVRVVCGPGLRRCGDRLLVTKCGRLRHKEAGGGGGSGVYWVDSQQKRYVPVKGDHVIGI
VTAKSGDIFKVDVGGSEPASLSYLAFEGATKRNRPNVQIGDLIYGQFVVANKDMEPEMVC
IDSCGRANGMGVIGQDGLLFKVTLGLVRKLLAPNCEILQEVGKLYPLEIVFGMNGRIWVK
AKTIQQTLILANVLEACEHMTADQRKQIFSRLAES
NT seq 828 nt   +upstreamnt  +downstreamnt
atggctgagccagccgctcatgctgcggagtcctttgctggttgcagggcgcgggcagcc
cgtacagtgctggatcaggtggtgctcccgggtgaggagctgctgctgcctgagcaggag
gacggagaaggcccaggaggtgcaggggagcgaccgctgcgcctgaacgccggagcgcgc
ccgcgggtgcgcgtggtgtgtggcccgggcttgcggcgttgtggcgaccggctgctggtc
accaagtgcggccgcctccgtcacaaggaggccggcggcggcggcggcagtggcgtctat
tgggtggactcgcagcagaagcggtatgttccagtcaaaggagaccatgtgattggcata
gttaccgctaaatctggagatatattcaaagttgatgttggagggagtgagccagcttct
ttatcttacttggcatttgaaggtgcaactaaaagaaacagaccaaatgttcagattgga
gatctcatctatggccaatttgtagttgctaataaagatatggaaccagagatggtctgt
attgacagctgtggacgagccaacggaatgggtgtgattggacaagatggtctgcttttt
aaagtgactttgggcttagttagaaagctgctagctccaaactgtgaaatcctacaagaa
gtgggaaaactctacccacttgagatagtatttggaatgaatggaagaatatgggttaaa
gcaaaaaccattcagcaaactttgattttggcaaatgttttagaagcttgtgaacacatg
acagcagatcaaagaaaacagatcttctccagattggcagaaagttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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