KEGG   Sus scrofa (pig): 100152596
Entry
100152596         CDS       T01009                                 
Symbol
VPS52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X1
  KO
K20298  vacuolar protein sorting-associated protein 52
Organism
ssc  Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssc04131]
    100152596 (VPS52)
Membrane trafficking [BR:ssc04131]
 Protein recycling
  Others
   EARP complex
    100152596 (VPS52)
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    100152596 (VPS52)
SSDB
Motif
Pfam: Vps52_C Vps52_CC Sec3_CC Dor1 Sec3_C-term COG6_N ATG16
Other DBs
NCBI-GeneID: 100152596
NCBI-ProteinID: XP_001925428
Ensembl: ENSSSCG00000001501
UniProt: A0A8D1G831 A0A8D1Z286
Position
7:complement(29624224..29639168)
AA seq 723 aa
MAAAATMAAAARELVLRSGASDMEEEEGPLGGGPGLQEPLQLGELDLTSDEFILDEVDVH
IQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYIQESENIASLHNQITACD
AVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLVVPSA
LVTAILEAPVTEPRFLEQLQELDAKAAAVREQEARGTAACADVRGVLDRLRVKAVTKIRE
FILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKEVRDEYVETLSKMYLSYY
RSYLGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSKPSLRSRNTIFTLGTRGSVISPTELE
APILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFICEFFVVSGPAAHDLFHAVMG
RTLSMTLKHLESYLADCYDAIAVFLCIHIVLRFRNIAAKRDVPALDRYWEQVLALLWPRF
ELILEMNVQSVRSTDPQRLGGLDTRPHYITRRYAEFSSALVSINQTIPNERTMQLLGQLQ
VEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDSKEVESFQQLLNARTQEF
IEELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKSSVESLSQDV
MRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQPQLRALPARAELINIHHLMVELKKHK
PNF
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggctgccgctgctaccatggcggcagccgcccgggagctggtgttgcggtccggggcc
tcagatatggaggaggaggagggcccactggggggtggtccaggtctccaggagccactg
caacttggagagttggacctcacctctgatgaattcatcctggatgaagttgatgttcac
attcaggcaaatctggaggatgagttagtaaaggaagctcttaaaacgggtgtggatctc
cgtcactattcaaagcaggttgaactggagctacagcagattgagcagaaatccattcgt
gattatatccaagaaagtgagaacatagcatctctgcacaatcagatcacagcctgcgat
gctgtccttgagcgcatggagcaaatgttgggagcttttcagagtgacctcagctccatc
agctctgagatccggacgctgcaggaacagtcaggagccatgaacattaggcttcgaaac
cgccaggctgtccgtgggaagctcggggagcttgtcgatggtctggtggtgccctctgct
ctggtcacggcaattctggaggcgccagtgacagagccccggttcctggaacagctgcag
gagctggatgccaaggcagctgcagtccgggagcaggaggctagaggcacagcggcctgt
gcagatgtcaggggcgtgctggaccggctccgggtcaaggcggtaacaaagatccgagag
ttcatccttcagaagatctattccttcaggaaaccaatgaccaactatcagatcccccaa
acggccctactgaagtacaggttcttctatcagttcctgctgggcaatgagcgggccacg
gccaaggaggtcagggacgaatacgtggagacgctgagcaagatgtacctgtcttactac
cgctcctacctggggcggctcatgaaggtgcagtatgaggaagtcgctgagaaggatgat
ctgatgggcgtggaggacacagcaaagaaaggcttcttctcaaagccgtccctccgcagc
aggaacaccattttcaccctggggacccgtggctccgtcatctcgcccactgaactggaa
gcccccatccttgtgccgcacacagcgcagcggggagaacagaggtacccttttgaggca
ctcttccgcagccagcactatgccctcctggacaactcctgccgagaatatcttttcatc
tgcgagttcttcgtggtgtctggcccggctgcacacgacctcttccacgctgtcatgggc
cgcaccctcagcatgacgctgaagcacctggagtcttacctggccgactgctacgatgcc
atagcggtttttctctgtatccatattgttctccggttccgaaacattgcagcaaagagg
gatgtccccgccctggacaggtactgggaacaggtgcttgccttgctgtggccgcggttt
gagctgatcctggagatgaacgtccagagcgtccggagcactgacccccagcgcctcggg
gggctggacactcggcctcactatatcacacgccgatatgcagagttctcctctgccctc
gtcagcatcaatcagacgattcccaatgagcggacgatgcagctgctgggtcagctacag
gtggaggtggagaattttgtcctccgagtagcagccgagttctcctcaaggaaggagcag
cttgtgtttctgatcaacaactatgacatgatgctgggcgtgctgatggagagggctgct
gatgacagcaaagaggttgaaagtttccagcagctgctcaatgctcggacacaggaattc
atcgaagagctgctatctcccccttttgggggtctggtggcatttgtgaaggaagctgag
gccctgattgagcgtgggcaagccgaacgactccgaggggaagaagcccgcgttactcag
ctgatccggggctttggcagttcctggaagtcgtctgtggagtccctgagccaggatgtc
atgcggagcttcaccaacttcaggaatggaaccagcatcatccagggagcactaacccag
ctgatccagctctaccaccgcttccaccgtgtgctgtcccagccccagctccgagccctc
ccagcccgtgctgagcttatcaacatccaccacctcatggtggagctcaagaagcacaag
cccaacttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (15)   
   RefSeq(nuc) (3)   
   GenBank (6)   
   EMBL (6)   
Protein domain (7)   
   Pfam (7)   
All databases (40)   

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